Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0515 ATGATTCCCTGGGGTGGAGTCAGTTGCTGCTTGAGTGCGGCTGCTGTTTACCTTCTCGGGAGAAGCAGTGGCAGAGATGCGGAAATTCTTAAATCTGTTACCCGTGTCAACCAGTTAAAAGAATTAGCACAATTGTTAGATGCCGAAATATTACCTGTGGTTGTTGCAATTTCTGGAAGAGTTGGCTCTGAAACCCCAGTTAACTGTGAATTCAGTGGTTTAAGGGGTGTAATAGTTGAAGAAACGGCAGAGCAACATTTTCTTAAACACAACGATGCTGGTTCGTGGATACAAGATTCTGCTTTAATGCTATCCATGAGTAAAGAAGTTCCTTGGTATCTGGATGATGGAACTGGTCATGTTCATGTGTTTGGAGCTCGTGGTGCTACTGGTTTTGTATTGCCTGTTGGAAGTGAAGCGTTTGAAGAGTCAGGTCGATCACTTGTGCGCGGAACATTAGATTATCTCCAAGGTCTTAAGATGCTTGGAGTCAAGAGAATTGAACGAGTACTTCCGATTGGCACATCCTTGACGGTTGTTGGTGAGGCTGCTAAAGATGATGTTGGAAACATCCGGATTCAGCGACCCCAAAAAGGGCCATTTTATGTCTCTCCAAAAACAATTGATCAGCTCATTGCCAATCTTGGGAAGTGGGCAAGGTGGTATAAGTATGCATCTGTGGGCTTTACTCTTTTCGGTGCTTATTTAATGGCCAAGCATGCTATTCAATACATATGGGAAAGAAGACGACGCTGCGAACTGCAAAAGAGGGTTCTTGCTGCAGCTGCTAAGAGGTCAGGACAAGATAGTGAAGGTGAAAAGGCTGAAAGTTTATCAGATGGTGCAAAAAAGGATCGCATAATGCCAGATTTATGTGTAATATGCCTCGAGCACGAGTACAATGCTGTTTTTGTTCCGTGTGGGCACATGTGCTGCTGTACGACATGTTCTTGCCACTTAACTAGCTGTCCTCTATGCCGGGGGCGAATAGAGCAGGTAGTGAAGACATATCGTCATTGA 1020 0.4451 MIPWGGVSCCLSAAAVYLLGRSSGRDAEILKSVTRVNQLKELAQLLDAEILPVVVAISGRVGSETPVNCEFSGLRGVIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWYLDDGTGHVHVFGARGATGFVLPVGSEAFEESGRSLVRGTLDYLQGLKMLGVKRIERVLPIGTSLTVVGEAAKDDVGNIRIQRPQKGPFYVSPKTIDQLIANLGKWARWYKYASVGFTLFGAYLMAKHAIQYIWERRRRCELQKRVLAAAAKRSGQDSEGEKAESLSDGAKKDRIMPDLCVICLEHEYNAVFVPCGHMCCCTTCSCHLTSCPLCRGRIEQVVKTYRH 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0515 339 FunFam E3 ubiquitin-protein ligase SP1 280 338 - -
Acco06g0515 339 PANTHER - 1 306 IPR044231 GO:0004842|GO:0016567
Acco06g0515 339 Pfam Zinc finger, C3HC4 type (RING finger) 290 333 - -
Acco06g0515 339 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 262 338 IPR013083 -
Acco06g0515 339 SUPERFAMILY RING/U-box 291 333 - -
Acco06g0515 339 ProSiteProfiles Zinc finger RING-type profile. 292 327 IPR001841 -
Acco06g0515 339 Pfam E3 Ubiquitin ligase 85 233 IPR022170 GO:0004842|GO:0006996|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0515 Acco-ChrAcco06 3207263 3210090 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0515 1 272 C3H Transcription Factor Family AT1G63900 77.372 4.99e-156 436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g0515 06 3207263 3210090 Acco06g0515 06 3207263 3210090 ECH