Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0504 ATGAAAGAGAAGGTAGATTCTCCAGTAGGAGTTCTGGAGGACTATTTTGGAAGTACAGAGTCAGAAACCAGTTGGTCCAATTCCAAAGATCCCACGGTGGGTTCTGGCTTCGAAGATGATAAGTCAAAACATGCCTATAGACGGCCGGGTTTCCTTCAATTGTTGCGGACCAGATCAAAGAAACATATTGCCCTATTGCATTCTCTGAGTGCCCTCAAGTTCTCCAAGAGATTCAATCGCGGAACAAAGGAGACTATACTGCCAAATCATCACATTGATGCAGATTCGTCCCTCCACGGATCATCCTGCAAGATCTTTACCCAGCGTGACATTCAGATGGCAACTCATCATTTCAGCCAGAAGAATTTGATTGGAAAAGGGGGTTATGCTGAAGTTTACAAAGGGTGTTTGCGAAATGGTCAGCTGGTAGCAATTAAACGGCTAACTCGAGGAACCCAAGATGAGATGATAGGGGATTTTCTATCAGAACTGGGCATAATGGCGCATGTGAACCACCCCAATACTTCTAAGTTGGTTGGCTATGGAGTGGAAGGAGGAATGCATCTTGTCCTTGAATTGTCTGAAAAGGGGAGCTTAACTTCCTTGCTTTATGGTTCGAAAGAGAAACTACCATGGTGTGCAAGGCACAAAATTGCGTTGGGAACGGCCAAAGGTATACTTTATCTTCACGAGGGCTGTCGTAGGAGAATTATCCACAGAGATATAAAGGCTGCAAATATCTTGCTCTCCGAGGACTTTGAACCTCAGATTTGTGATTTTGGGCTGGCAAAATGGCTGCCAGAGAATTGGACTCACCACATCGTTTCAAAATTTGAAGGGACTTTTGGCTACCTCGCTCCAGAATACTTGCTTCATGGCATAGTAGACGAGAAAACAGACGTATATGCCTTCGGTGTATTGCTTTTAGAATTGGTCACTGGGCGGCGAGCGCTTGATTATTCACAGCAAAGCCTTGTTTTATGGGCAAGACCATTGCTGAAAAAGAATGAAACTAGGGAGTTGGTTGACCCTTCACTAGGCCAAGACTATGACTGTGGTCAGATTCATTTGGTGCTCTTGGTAGTTTCTGTATGCATCCAACAATCCGCGATTCGTCGGCCCTCCATGAGACAGGCACGTTCTCCTCAAATTCTAACTCATAACATAGACGTTCTTCAATTCAAAGTTGATTTAGCAATTGAGATATTGGTGCAGGTTGTGCAGCTTCTGAACGGCAACCTTAGCTGCTGTAAGCACATGAAGAAAACTCGAGTCTCATTTGTTCGTAAAGTCTTAGAGGAAAAGTTCCTCCATTCTGAGTAG 1323 0.4437 MKEKVDSPVGVLEDYFGSTESETSWSNSKDPTVGSGFEDDKSKHAYRRPGFLQLLRTRSKKHIALLHSLSALKFSKRFNRGTKETILPNHHIDADSSLHGSSCKIFTQRDIQMATHHFSQKNLIGKGGYAEVYKGCLRNGQLVAIKRLTRGTQDEMIGDFLSELGIMAHVNHPNTSKLVGYGVEGGMHLVLELSEKGSLTSLLYGSKEKLPWCARHKIALGTAKGILYLHEGCRRRIIHRDIKAANILLSEDFEPQICDFGLAKWLPENWTHHIVSKFEGTFGYLAPEYLLHGIVDEKTDVYAFGVLLLELVTGRRALDYSQQSLVLWARPLLKKNETRELVDPSLGQDYDCGQIHLVLLVVSVCIQQSAIRRPSMRQARSPQILTHNIDVLQFKVDLAIEILVQVVQLLNGNLSCCKHMKKTRVSFVRKVLEEKFLHSE 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0504 440 PANTHER OS08G0249100 PROTEIN 6 415 IPR046958 -
Acco06g0504 440 SUPERFAMILY Protein kinase-like (PK-like) 99 381 IPR011009 -
Acco06g0504 440 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK2 88 192 - -
Acco06g0504 440 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Acco06g0504 440 SMART serkin_6 118 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0504 440 Gene3D Transferase(Phosphotransferase) domain 1 195 393 - -
Acco06g0504 440 ProSiteProfiles Protein kinase domain profile. 118 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0504 440 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 195 398 - -
Acco06g0504 440 MobiDBLite consensus disorder prediction 18 33 - -
Acco06g0504 440 ProSitePatterns Protein kinases ATP-binding region signature. 124 146 IPR017441 GO:0005524
Acco06g0504 440 Pfam Protein kinase domain 119 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0504 440 Gene3D Phosphorylase Kinase; domain 1 89 192 - -
Acco06g0504 440 MobiDBLite consensus disorder prediction 18 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0504 Acco-ChrAcco06 3116949 3118786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0504 106 379 Receptor kinase-like Gene Family AT1G53420 42.199 6.04e-66 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Acco06g0504 Pkinase 3.2e-42 CL0016