Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0469 ATGGAAGCATTCCATTTCCGGAACCCCAGGATGGTTAATCGAACTCTTTCTTGCGCATCTCCTTCCAGAAAACCAAAGCAGAATGTTGGGGTTTCAAATGCACAGTTCTTGTTCTTTTTTCTGAACCGATGGCCTCCTAGAGCAGTCTCCTTCAAAATTGAAGCAAATAATTCGGATTTCACTATCGCATACCTCATAGATTCTTGTGGATTGGCTCCAGAAGCTGCTGCTTCAGTTTCGCAGAAGATAAAGATACATTCAGGAGAGAGACCGGATTCTGTCCTAACACTGCTCAGAGAACACGGCCTCTCAAAATCCCAGATTTCAAATGTCGTAAGGAAGCGTCCATCGCTCCTTTTAGCTAATCCCAATGATATCCTTTTGCCAAAGCTTGAATTCTTTTACTCCATAGGGATTTCCAGGTCTGACCTCGCAAGAATCCTCGCTACAGACCCAACCGTTCTGAAAAGAAGCTTGGAGAAACAGATAATTCCCTCTTATAATTTCCTCAAAAGTGTGTTACTTTGTGATGAGAGGGTCGCTTCTGCGTTGAAGCGCACGTCGTGGATTTTTCTGGAAGACCATACGAAGAAGCTCGTACCAAATATCTCCGTTCTGAGAGCAACAGGTGTGCCAGAATCATGCATTGCATTGTTGCTCGCTCATTTTCCCGAGGCATTAATTCAAAAGAACGATCAATTCGTAAAGATTGTCGAAGAGGTCAAGGAAATGGGATTCGATCCAACCAAGTCGACATTTGTGTTAGCGATCCACGTAATCGGAGGTAATAAATCGATATATAATCGCTGCTACGAGGTGTACCGGAGGTGGGGGTGGTCTGAGGAAGAAATTCAAATGGCATTCAGAAAGCATCCGAATTGTATGCTTCTATCGGAGGACAAAATAACGAAAGCAATGGACTTTCTGGTGAACAAGATGGGTAGGCCTTCGAGGATGATAGCGAGATGCCCAGTGGTGTTGTTCTTCAGCTTGGAAAAGAGAATCAAGCCGAGGTGTTATGTTGTTCAGGCTCTGCGAATGAAGGGCTTGATCAAGAAGACTCTGAGCTTGTCTACTGTGTTGTTGCCGGATAAGAAGCGTTTCGAGGAGAAGTTCGTGACAAAGTATGAGCATCAGGTGCCTGAACTGTGGAGTGTCTATAAGATGAAAGTGGATTTTAGGAGCGTCATTTGA 1194 0.4439 MEAFHFRNPRMVNRTLSCASPSRKPKQNVGVSNAQFLFFFLNRWPPRAVSFKIEANNSDFTIAYLIDSCGLAPEAAASVSQKIKIHSGERPDSVLTLLREHGLSKSQISNVVRKRPSLLLANPNDILLPKLEFFYSIGISRSDLARILATDPTVLKRSLEKQIIPSYNFLKSVLLCDERVASALKRTSWIFLEDHTKKLVPNISVLRATGVPESCIALLLAHFPEALIQKNDQFVKIVEEVKEMGFDPTKSTFVLAIHVIGGNKSIYNRCYEVYRRWGWSEEEIQMAFRKHPNCMLLSEDKITKAMDFLVNKMGRPSRMIARCPVVLFFSLEKRIKPRCYVVQALRMKGLIKKTLSLSTVLLPDKKRFEEKFVTKYEHQVPELWSVYKMKVDFRSVI 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0469 397 PANTHER CGI-12 PROTEIN-RELATED 59 376 IPR003690 GO:0003690|GO:0006355
Acco06g0469 397 SMART mt_12 285 316 IPR003690 GO:0003690|GO:0006355
Acco06g0469 397 SMART mt_12 181 212 IPR003690 GO:0003690|GO:0006355
Acco06g0469 397 SMART mt_12 145 176 IPR003690 GO:0003690|GO:0006355
Acco06g0469 397 SMART mt_12 109 140 IPR003690 GO:0003690|GO:0006355
Acco06g0469 397 SMART mt_12 217 247 IPR003690 GO:0003690|GO:0006355
Acco06g0469 397 SMART mt_12 317 351 IPR003690 GO:0003690|GO:0006355
Acco06g0469 397 FunFam Mitochondrial transcription termination factor-like 159 380 - -
Acco06g0469 397 Pfam mTERF 95 248 IPR003690 GO:0003690|GO:0006355
Acco06g0469 397 Pfam mTERF 263 369 IPR003690 GO:0003690|GO:0006355
Acco06g0469 397 Gene3D Transcription termination factor 3, mitochondrial 153 388 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0469 Acco-ChrAcco06 2949483 2950676 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Acco06g0469 mTERF 3.3e-24 No_clan