Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0465 ATGTCAAATATTTCAGGTGATGAAGTAAGTTTGTCCTCAGGAGAAGATCTCCAATATCAGGAAAACCAGCAGCAGCAGCAACACAACAACTTGCTTGGCTCAACCTCAACACCTTCCAACAAAAATGCCTCCAATCCGAACGCTGAAGTGATTGCTTTGTCACCGACAACTTTGATGGCAACGAACAGATTTGTGTGTGAGATATGCAACAAAGGGTTTCAGAGGGACCAGAACCTACAGTTGCACCGGAGAGGTCACAATCTGCCATGGAAGCTGAGACACAGAGCGAGCAATGAGGTGCTCAAGAAACGTGTTTACGTGTGTCCAGAGCCTTCATGCGTCCACCATAGCCCAGCTCGAGCACTCGGAGACCTCACCGGCATCAAAAAGCACTTTAGCCGCAAACACGGCGAGAAGAAATGGAAATGTGACAAATGCTCAAAAAAATACGCCGTCCAATCTGATAGGAAAGCCCACCAGAAAACCTGCGGTACCCGCGAATACAAATGCGATTGTGGCACCATATTTTCCAGGAGAGATAGTTTTATCACTCACAGAGCATTTTGTGATGCATTGGCTGAAGAAAACAACAGGGTGAATTCTGCGGTATCTCTAAACACTTATTCCAACATATCATCTGAATTAAACACAATGGTTCCTCAAGAAATTCTTCCGGTGCCGTTCAAGTCGACGAGCACGAGCATGTGGGGGGGCATGTTCACCACCGCTTCAGGCGCACTTCTCAGTGGTCCAAAAGGCTTGCCTCCTTCTCTTCCCCAGCCTAGCTCCCCTGTTTTCAATTCCGTCCAAGATGGACAGAGAGTTTCAGAGTCAGCTCACGCGTCTGCCACGGCTTTACTGCAGAAAGCAGCTCAAATGGGAGCCACCGTGACCAATGATAGCAATAACTCTCGCATGGTTCAAAAAGGGTATGTTACTTCCATGGCAGGTCCTGATTACCACCCTGAACCTAACATGGCTGGACTTAGCAGTGGAGGTGGAGAATTCAGCAACCTGTTGTTCCACAAAGGTCCGCAAGAAATGTCTCAATCGTTTGATTCTTACAATGGATCATCTGCTTTGAATGATATGGAAATGTTGAACCAAATGGTGATGGGAGGAAGAGAAGGAGGAGCAAGTGAGATGACCAGAGTTCATGACTTCTTGGGCGTTGGGGGACCCACTCCCATGCCGCCCAATTTGCATGGAGATTGGAAGATGGCTCATAGCCTACATTACAAAGAAGAAAGTTTCATTAAAGAGGAATTTAATCCTAAACACTCTTGGTCCAACCATGCACATAAATGA 1308 0.4687 MSNISGDEVSLSSGEDLQYQENQQQQQHNNLLGSTSTPSNKNASNPNAEVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRHRASNEVLKKRVYVCPEPSCVHHSPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDRKAHQKTCGTREYKCDCGTIFSRRDSFITHRAFCDALAEENNRVNSAVSLNTYSNISSELNTMVPQEILPVPFKSTSTSMWGGMFTTASGALLSGPKGLPPSLPQPSSPVFNSVQDGQRVSESAHASATALLQKAAQMGATVTNDSNNSRMVQKGYVTSMAGPDYHPEPNMAGLSSGGGEFSNLLFHKGPQEMSQSFDSYNGSSALNDMEMLNQMVMGGREGGASEMTRVHDFLGVGGPTPMPPNLHGDWKMAHSLHYKEESFIKEEFNPKHSWSNHAHK 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0465 435 Gene3D Classic Zinc Finger 40 110 - -
Acco06g0465 435 ProSitePatterns Zinc finger C2H2 type domain signature. 66 86 IPR013087 -
Acco06g0465 435 SUPERFAMILY beta-beta-alpha zinc fingers 63 162 IPR036236 -
Acco06g0465 435 SMART c2h2final6 141 161 IPR013087 -
Acco06g0465 435 SMART c2h2final6 106 136 IPR013087 -
Acco06g0465 435 SMART c2h2final6 64 86 IPR013087 -
Acco06g0465 435 FunFam protein indeterminate-domain 12-like 43 112 - -
Acco06g0465 435 FunFam protein indeterminate-domain 5, chloroplastic-like 119 198 - -
Acco06g0465 435 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 20 421 IPR031140 -
Acco06g0465 435 Gene3D Classic Zinc Finger 120 199 - -
Acco06g0465 435 MobiDBLite consensus disorder prediction 1 46 - -
Acco06g0465 435 ProSiteProfiles Zinc finger C2H2 type domain profile. 64 86 IPR013087 -
Acco06g0465 435 Pfam Zinc finger, C2H2 type 64 86 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0465 Acco-ChrAcco06 2897308 2899401 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0465 1 296 IDZ Gene Family AT1G55110 52.599 2.54e-101 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Acco06g0465 zf-C2H2 0.0043 CL0361
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1551 02 11879702 11881476 Acco06g0465 06 2897308 2899401 CCT
Acco06g0465 06 2897308 2899401 Acco06g0465 06 2897308 2899401 ECH