Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0464 ATGAGCGATAACTCAGAGAGAGAAGGCTTTAACAAGTACAACTTCAACAACATCACAGGATCTCATCAACATCATCATCTTCAAGATGTGGGAGGAGTCATCAAAGAGCAAGATCGGTTGCTTCCAATAGCGAATGTTGGGAGGATTATGAAGCAAATTCTGCCTCCTAACGCCAAAATCTCCAAAGAAGCCAAAGAAACAATGCAAGAATGTGTTTCTGAGTTCATAAGCTTCGTGACTGGCGAGGCCTCTGACAAGTGTCACAAGGAGAAGCGCAAGACAGTGAACGGCGACGATATTTGCTGGGCCCTCGCCACTCTAGGATTTGACGACTACGCCGAGCCCCTCAAGAGGTATTTAATTAAGTTTAGGGAATCAGAGGGCGAGAGATCTAACCAAAATAATGCAAACAATATTCATACTGATCAAGAACTTAATACTATTGGTGATGATCATCATCAAGCTTATGAATTTGGAGGTGAGCCTCCTAGGAGAGCCCCCACTACTGCTCCTAGTGCTTCCTCTGCTAGTGGTACCTCATTGATGAGATTCAATGGCACCTCTCGTTCACGCCAGTTTTCAAACTTCTAG 591 0.445 MSDNSEREGFNKYNFNNITGSHQHHHLQDVGGVIKEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICWALATLGFDDYAEPLKRYLIKFRESEGERSNQNNANNIHTDQELNTIGDDHHQAYEFGGEPPRRAPTTAPSASSASGTSLMRFNGTSRSRQFSNF 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0464 196 ProSitePatterns NF-YB/HAP3 subunit signature. 71 87 IPR003956 GO:0005634|GO:0006355|GO:0043565
Acco06g0464 196 MobiDBLite consensus disorder prediction 153 196 - -
Acco06g0464 196 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 40 104 IPR003958 -
Acco06g0464 196 MobiDBLite consensus disorder prediction 168 196 - -
Acco06g0464 196 SUPERFAMILY Histone-fold 37 141 IPR009072 GO:0046982
Acco06g0464 196 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 22 144 IPR027113 GO:0001228|GO:0006355|GO:0016602
Acco06g0464 196 FunFam Nuclear transcription factor Y subunit B-3 30 154 - -
Acco06g0464 196 Gene3D Histone, subunit A 33 157 IPR009072 GO:0046982
Acco06g0464 196 PRINTS CCAAT-binding transcription factor subunit A signature 106 124 - -
Acco06g0464 196 PRINTS CCAAT-binding transcription factor subunit A signature 68 86 - -
Acco06g0464 196 PRINTS CCAAT-binding transcription factor subunit A signature 87 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0464 Acco-ChrAcco06 2886561 2887151 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0464 10 132 CCAAT-HAP3 Transcription Factor Family AT2G47810 68.421 1.04e-62 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Acco06g0464 CBFD_NFYB_HMF 1.6e-27 CL0012