Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0461 ATGGTTGATATTCACATCAAGCTAGATGCTCCTTACCGAAAATATTCTCCTAAATTGAATGATGGGAGAGTCATCAAAGAGCAAGATCGGTTGCTTCCAATAGCGAATGTTGGGAGGATTATGAAGCAAATTCTGCCTCCTAACGCCAAAATCTTCAAAGAAGCCAAAGAAACAATGCAAGAATGTGTTTCCGAGTTCATAAGCTTCGTGACTGGGGAGGCCTCGACAAGTGTCACAAGGAAAAGCGCAAGACAGGAATCAGAGGGCGAGAGATCTAACCAAAATAATGCTAACAATATTCATCCTGATCATGAACTTGATACTATTATTGGAGATGATCATCATCAAGCTTATGAATATGGAGGTGAGCCTCCTAGGAGAGCCCCCACTACTGCTGCTAGTGGTACCTCATTGATGAGGTTCAATGGCACCTCTCGTTTACGCCAGTTTTCAAACTTCTAG 462 0.4264 MVDIHIKLDAPYRKYSPKLNDGRVIKEQDRLLPIANVGRIMKQILPPNAKIFKEAKETMQECVSEFISFVTGEASTSVTRKSARQESEGERSNQNNANNIHPDHELDTIIGDDHHQAYEYGGEPPRRAPTTAASGTSLMRFNGTSRLRQFSNF 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0461 153 SUPERFAMILY Histone-fold 28 80 IPR009072 GO:0046982
Acco06g0461 153 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 31 82 IPR003958 -
Acco06g0461 153 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 23 81 IPR027113 GO:0001228|GO:0006355|GO:0016602
Acco06g0461 153 Gene3D Histone, subunit A 23 104 IPR009072 GO:0046982
Acco06g0461 153 MobiDBLite consensus disorder prediction 74 104 - -
Acco06g0461 153 MobiDBLite consensus disorder prediction 116 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0461 Acco-ChrAcco06 2865931 2866685 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0461 24 81 CCAAT-HAP3 Transcription Factor Family AT2G47810 79.310 1.86e-27 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Acco06g0461 CBFD_NFYB_HMF 3.4e-17 CL0012
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g0461 06 2865931 2866685 Acco06g0461 06 2865931 2866685 ECH