Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0452 ATGAAGGGAACACTAGCTAGTCACTTGCAGAATCAGCTAGGGCAAGTATCCCTCCTTCCTTTTCACCAACAGTCGTCATCTTCCGCCGTCCCTCGCTTCCAGAACCTTCTTGAAGCCGAAGCCCGTGACAGCAATCTTCCCTCATCTTCCCCTGTCGCTCTGGATCATATGGTTGACAACAATGTGGACGACAAAGATTTCATTCTCAGCCAAGATTTCTTCTGGTACACAAATGGTGTCTTAGGGAATCCTCTCAGTCCTACTTTATCTGGTGGTCATCAAGCTGTGGAGCTTGGAACCGAGTCTGCAGCAGATGAAGAAGATATTGAGAAACTGGTTTCCACTAGCAAACCGAAGGCTCAAAATTATCTTTCACATTCTGTGGTTGCCTTGCGCTCTAGGGTCATACCCCCTCCCTGCATTAGGAACCCGTATTTGAAAGATGCTTTAGATAATGACAAAGATCCCTATGGAAACCAAAGATCAAAATATGCAGGTATGTTCCCTCCAATTACTGGCGGTGATGGGCTTTCACGCTATCGCACTGATTTCCATGAGATTGAGCAAATTGGTATAGGAAACTTTAGCAACGTTTTCAGAGTTTTAAAGAGGATAGACGGTTGCTTGTATGCTGTGAAACACAGCACAAGACAGTTGTGCCAGGAAACAGAAAGGAGAAAAGCTTTGATGGAAGTTCAAGCACTGGCTGCCTTAGGATCCTATGAAAACATAGTGGGGTACTATTCTTCATGGTTTGAAAATGAGCGGCTGTACATTCAGATGGAGTTATGTGATCATAGCTTATCCATAAGCAAGGCCAATACAATGTTTACGGAAGGCCAAGTGTTAGAAGTACTGCATCAGGTTGCAAAGGCACTGTTGTTTATACATGAAAGAGGCATAGCTCATCTTGATGTTAAACCTGATAATATTTATGTCAAAAATGGTGTTTATAAGCTTGGTGATTTTGGCTGTGCAACTCTCATTGATAAGAGCCTGCCAATTGAAGAGGGTGATGCACGTTATATGCCCCAGGAAATCCTGAATGAGAATTATGATCACCTTGACAAGGTTGATATCTTTTCTTTGGGAGCTTCTATTTTTGAGCTCATTCGAGGATCGCCTTTGCCAGAATCAGGATGTAAATCTTTTAATCTGAAAGAAGGCAGGTTGCCACTCTTGCCTGGCCATTCGTTGCAATTTCAGAACTTGCTCAAGGTCATGATGGACCCTGATCCAGTTAAACGACCTAGCGCAAGAGAATTAGTGGAGAACCCAATCTTTGATTGGGCCCTAAGAAAGTAA 1305 0.4337 MKGTLASHLQNQLGQVSLLPFHQQSSSSAVPRFQNLLEAEARDSNLPSSSPVALDHMVDNNVDDKDFILSQDFFWYTNGVLGNPLSPTLSGGHQAVELGTESAADEEDIEKLVSTSKPKAQNYLSHSVVALRSRVIPPPCIRNPYLKDALDNDKDPYGNQRSKYAGMFPPITGGDGLSRYRTDFHEIEQIGIGNFSNVFRVLKRIDGCLYAVKHSTRQLCQETERRKALMEVQALAALGSYENIVGYYSSWFENERLYIQMELCDHSLSISKANTMFTEGQVLEVLHQVAKALLFIHERGIAHLDVKPDNIYVKNGVYKLGDFGCATLIDKSLPIEEGDARYMPQEILNENYDHLDKVDIFSLGASIFELIRGSPLPESGCKSFNLKEGRLPLLPGHSLQFQNLLKVMMDPDPVKRPSARELVENPIFDWALRK 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0452 434 FunFam Wee1-like protein kinase 263 432 - -
Acco06g0452 434 FunFam WEE protein kinase 174 262 - -
Acco06g0452 434 ProSitePatterns Protein kinases ATP-binding region signature. 190 213 IPR017441 GO:0005524
Acco06g0452 434 Gene3D Phosphorylase Kinase; domain 1 175 262 - -
Acco06g0452 434 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 63 426 - -
Acco06g0452 434 SUPERFAMILY Protein kinase-like (PK-like) 176 429 IPR011009 -
Acco06g0452 434 SMART serkin_6 184 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0452 434 ProSiteProfiles Protein kinase domain profile. 184 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0452 434 Gene3D Transferase(Phosphotransferase) domain 1 263 431 - -
Acco06g0452 434 Pfam Protein kinase domain 184 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0452 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 301 313 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0452 Acco-ChrAcco06 2810445 2813891 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0452 1 429 Core Cell Cycle Gene Families AT1G02970 53.586 3.70e-174 495
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WEE Acco06g0452 Pkinase 2.9e-46 CL0016