Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0448 ATGGTTTCAAGCTCGAGCACATTTCCTGTTGGCAGGGAGGTCAATGCCATTGCAAATCTGTTTGTATATGATTTTCTTCGTGACGAGTATTTTTCTTACCAAGGTACTTCAAAAGCTCTCGCATGTATATCATTATTTAGCCTTGCATTTCATACCTTGTTGGCTCAATCACTGGTGAAATGCGCAGACGCAAGCACAAGGCATTTTCATAAGCTCCAAACTGAATGGGGCATATCAAAATTCATGGACCTCGTCTCGTTCAACGACCCTTCAAATGGTTTTCTGATTGAGGATGCCTGCGTTTTCGGAGCCGAGATCTTTGTCATAAAGCCTCCTTCCAAGCAAGAATGCTTATCAATGATACATGAACCTCCTCTTGTGCCTTATAGGTGGAAATTCGATAACTTTTCAGGACGTTCCTTAGACGAGTATTGGTCCGAAATTTTCCCTGCCGGAAACTACCGATGGAGACTCGATTTCTTCCCTAATGGGACAGCTGAGGGCAAGCGCAATAGTGTCTCTCTGTTTCTGACCGTAGACACATCGTCGTCAATTCCACTTAACACCAAATTATATGTGTCCTTCATTTTGCGCGTCAAGGACCAAATCAAGGGACAGCATGCTGAAATAAAATCCTATAAGCACTTCTCCAGCTCGTATCCCACGTGGGGATCAAGAAAGTTCTTGCCATTGGCCACATTCAAGGACCCAGCTAAGGGCTTTTTAGAAGCAAATAGCTGTATCCTCGAAACAGAGATTAAGTGCATGCATCGTCACGAAGAGCATATTCAGGAGATATTGGATGGGATAAGGACTCTATCCATATACCCAACTGGCAACAAGAAAAAGGACGGGCAGGGTCATATCTCAGCGTATTTGAATTTGATGGTTTCAAGCTCGAGCACATTTCCTGTTGGCAGGGAGGTCAATGCCATTGCAAATCTGTTTGTATATGATTTTCTTCGTGACGAGTATTTTTCTTACCAAGACGCAAGCACAAGGCATTTTCATAAGCTCCAAACTGAATGGGGCATATCAAAATTCATGGACCTCGTCTCGTTCAACGACCCTTCAAATGGTTTTCTGATTGAGGATGCCTGCGTTTTCGGAGCCGAGATCTTTGTCATAAAGCCTCCTTCCAAGCAAGAATGCTTATCAATGATACATGAACCTCCTCTTGTGCCTTATAGGTGGAAATTCGATAACTTTTCAGGACGTTCCTTAGACGAGTATTGGTCCGAAATTTTCCCTGCCGGAAACTACCGATGGAAACTCGTTTTCTACCCTAATGGGACTGCTGAGGGCAAGGGCAACAGTGCCTCTCTGTTTCTGACCGTAGACGCCTCGTCAATTCCACCTAACACTAAAGGGAAGAGCTGTGGGAGGAGGACCAGCAGTAGAAGACGAAGTGTGAGTAAGGGGTCGACCAAAATGAAGGGAACACTAGCTAGTCACTTGCAGAATCAGCTAGGGCAAGTATCCCTCCTTCCTTTTCACCAACAGTCGTCATCTTCCGCCGTCCCTCGCTTCCAGAACCTTCTTGAAGCCGAAGCCCGTGACAGCAATCTTCCCTCATCTTCCCCTGTCGCTCTGGATCATATGGTTGACAACAATGTGGACGACAAAGATTTCATTCTCAGCCAAGATTTCTTCTGCACTCCAGATTACATAACCCCGGATAATCAGTATATTTTTAACGGCTTGGACTGCAACAAGGAGAATATCCCATGTCCCAAGTCACCGGAAAAACTAAATACTACTAAAAGCAAGAGATGCCGATTGGATGGTGTCTTAGGGAATCCTCTCAGTCCTACTTTATCTGGTGGTCATCAAGCTGTGGAGCTTGGAACCGAGTCTGCAGCAGATGAAGAAGATATTGAGAAACTGGTTTCCACTAGCAAACCGAAGGCTCAAAATTATCTTTCACATTCTGTGGTTGCCTTGCGCTCTAGGGTCATACCCCCTCCCTGCATTAGGAACCCGTATTTGAAAGATGCTTTAGATAATGACAAAGATCCCTATGGAAACCAAAGATCAAAATATGCAGGTATGTTCCCTCCAATTACTGGCGGTGATGGGCTTTCACGCTATCGCACTGATTTCCATGAGATTGAGCAAATTGGTATAGGAAACTTTAGCAACGTTTTCAGAGTTTTAAAGAGGATAGACGGTTGCTTGTATGCTGTGAAACACAGCACAAGACAGTTGTGCCAGGAAACAGAAAGGAGAAAAGCTTTGATGGAAGTTCAAGCACTGGCTGCCTTAGGATCCTATGAAAACATAGTGGGGTACTATTCTTCATGGTTTGAAAATGAGCGGCTGTACATTCAGATGGAGTTATGTGATCATAGCTTATCCATAAGCAAGGCCAATACAATGTTTACGGAAGGCCAAGTGTTAGAAGTACTGCATCAGGTTGCAAAGGCACTGTTGTTTATACATGAAAGAGGCATAGCTCATCTTGATGTTAAACCTGATAATATTTATGTCAAAAATGGTGTTTATAAGCTTGGTGATTTTGGCTGTGCAACTCTCATTGATAAGAGCCTGCCAATTGAAGAGGGTGATGCACGTTATATGCCCCAGGAAATCCTGAATGAGAATTATGATCACCTTGACAAGGTTGATATCTTTTCTTTGGGAGCTTCTATTTTTGAGCTCATTCGAGGATCGCCTTTGCCAGAATCAGGATGTAAATCTTTTAATCTGAAAGAAGGCAGGTTGCCACTCTTGCCTGGCCATTCGTTGCAATTTCAGAACTTGCTCAAGGTCATGATGGACCCTGATCCAGTTAAACGACCTAGCGCAAGAGAATTAGTGGAGAACCCAATCTTTGATTGGGCCCTAAGAAAGTAA 2856 0.4391 MVSSSSTFPVGREVNAIANLFVYDFLRDEYFSYQGTSKALACISLFSLAFHTLLAQSLVKCADASTRHFHKLQTEWGISKFMDLVSFNDPSNGFLIEDACVFGAEIFVIKPPSKQECLSMIHEPPLVPYRWKFDNFSGRSLDEYWSEIFPAGNYRWRLDFFPNGTAEGKRNSVSLFLTVDTSSSIPLNTKLYVSFILRVKDQIKGQHAEIKSYKHFSSSYPTWGSRKFLPLATFKDPAKGFLEANSCILETEIKCMHRHEEHIQEILDGIRTLSIYPTGNKKKDGQGHISAYLNLMVSSSSTFPVGREVNAIANLFVYDFLRDEYFSYQDASTRHFHKLQTEWGISKFMDLVSFNDPSNGFLIEDACVFGAEIFVIKPPSKQECLSMIHEPPLVPYRWKFDNFSGRSLDEYWSEIFPAGNYRWKLVFYPNGTAEGKGNSASLFLTVDASSIPPNTKGKSCGRRTSSRRRSVSKGSTKMKGTLASHLQNQLGQVSLLPFHQQSSSSAVPRFQNLLEAEARDSNLPSSSPVALDHMVDNNVDDKDFILSQDFFCTPDYITPDNQYIFNGLDCNKENIPCPKSPEKLNTTKSKRCRLDGVLGNPLSPTLSGGHQAVELGTESAADEEDIEKLVSTSKPKAQNYLSHSVVALRSRVIPPPCIRNPYLKDALDNDKDPYGNQRSKYAGMFPPITGGDGLSRYRTDFHEIEQIGIGNFSNVFRVLKRIDGCLYAVKHSTRQLCQETERRKALMEVQALAALGSYENIVGYYSSWFENERLYIQMELCDHSLSISKANTMFTEGQVLEVLHQVAKALLFIHERGIAHLDVKPDNIYVKNGVYKLGDFGCATLIDKSLPIEEGDARYMPQEILNENYDHLDKVDIFSLGASIFELIRGSPLPESGCKSFNLKEGRLPLLPGHSLQFQNLLKVMMDPDPVKRPSARELVENPIFDWALRK 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0448 951 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 392 513 IPR008974 GO:0005515
Acco06g0448 951 SUPERFAMILY TRAF domain-like 129 256 - -
Acco06g0448 951 Gene3D Phosphorylase Kinase; domain 1 692 779 - -
Acco06g0448 951 Pfam MATH domain 135 254 IPR002083 GO:0005515
Acco06g0448 951 Pfam MATH domain 279 375 IPR002083 GO:0005515
Acco06g0448 951 ProSiteProfiles MATH/TRAF domain profile. 273 373 IPR002083 GO:0005515
Acco06g0448 951 SMART math_3 131 234 IPR002083 GO:0005515
Acco06g0448 951 SMART math_3 398 496 IPR002083 GO:0005515
Acco06g0448 951 CDD MATH 273 373 IPR002083 GO:0005515
Acco06g0448 951 ProSiteProfiles Protein kinase domain profile. 701 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0448 951 ProSitePatterns Serine/Threonine protein kinases active-site signature. 818 830 IPR008271 GO:0004672|GO:0006468
Acco06g0448 951 SUPERFAMILY TRAF domain-like 396 452 - -
Acco06g0448 951 SMART serkin_6 701 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0448 951 CDD MATH 129 254 IPR002083 GO:0005515
Acco06g0448 951 ProSitePatterns Protein kinases ATP-binding region signature. 707 730 IPR017441 GO:0005524
Acco06g0448 951 SUPERFAMILY Protein kinase-like (PK-like) 693 946 IPR011009 -
Acco06g0448 951 MobiDBLite consensus disorder prediction 453 478 - -
Acco06g0448 951 FunFam WEE protein kinase 691 779 - -
Acco06g0448 951 ProSiteProfiles MATH/TRAF domain profile. 126 253 IPR002083 GO:0005515
Acco06g0448 951 SUPERFAMILY TRAF domain-like 273 380 - -
Acco06g0448 951 SUPERFAMILY TRAF domain-like 11 113 - -
Acco06g0448 951 ProSiteProfiles MATH/TRAF domain profile. 1 106 IPR002083 GO:0005515
Acco06g0448 951 PANTHER TRAF-LIKE FAMILY PROTEIN 5 255 - -
Acco06g0448 951 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 1 118 IPR008974 GO:0005515
Acco06g0448 951 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 270 385 IPR008974 GO:0005515
Acco06g0448 951 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 127 265 IPR008974 GO:0005515
Acco06g0448 951 CDD MATH 396 450 IPR002083 GO:0005515
Acco06g0448 951 Pfam Protein kinase domain 701 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0448 951 ProSiteProfiles MATH/TRAF domain profile. 393 444 IPR002083 GO:0005515
Acco06g0448 951 Gene3D Transferase(Phosphotransferase) domain 1 780 948 - -
Acco06g0448 951 FunFam Wee1-like protein kinase 780 948 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0448 Acco-ChrAcco06 2782125 2791864 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0448 461 946 Core Cell Cycle Gene Families AT1G02970 58.233 0.0 585
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WEE Acco06g0448 Pkinase 1.6e-45 CL0016