Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0437 ATGATCTTGGCAATGACGACGATCTGTGGACCCATTCCTTCCGACCAAAGCCTCTCCTCTTCAAATTCGTCTCTCCTCAGTCCTCACTGTCGCTCTGAGTCTCACTATCCACTTCACATAAATTTCACCCCCGGCGATACATCACTCCGGCTTCCCACCGCCACCGGTCCTGAGCTCGATCATCTTTTCTTGTTCCCGCCATCCCGCCTCGCGGTTTCCCGGGTCACATCGTCTCAACCTCCCTTATTCTGGGTGAAGAGGGACCAAGCACAATTCAAAGGAGCCAACATCATGGTCGAAACCAGAGGGGGCTCGTCTAGTTCCAAGCGCTCTCGCTCCCCATCCTCTTCTTCCGACATCAAAAAACCCAAGGTGTCCAAGGATTCTTCGCCAAGAAGTCTGCCGTCAGCGGAAAATCTTGGTCCTGCTAACGAGCCTGGAAATGAATCCCGAGAGAAGGAGATAAGTTCGTCTAATCTTCCACATTCCGGTTCATTGAAAGGCACGGACGTTTGTGACGCTACGCTATCTGAGCAATCTCCCGCCATGGCCGTTATTGAAGGCGAGGTTTTGACATCGCCGCAGCCTCTAGGCGAAACTGCTGTGGACGGAGAGAAATCAAAGGTGATTGGAGCGGTCGCCGATGGCGAATCCAAGAAATGCTCAGGGAAAACGAGCCCGGAGGCTGCATGGGGAAGGCTTATTTCTCAGCGTTCCCAGAATCGACATCTGTCCTTGTGCGGTTCTCAATTCACTGTTGGTCATGGCTGTCAATGCAATTTATGGCTTAATGATCCAGCTGTTAGTGATGTTTTGTGCAAGTTGGAGCCTACCAAGCGTGGAGGTTCATCTGTTGGATTACTGGAAATCACAGGGGTTAAAGGTTCCGTACAAGTTAATGGCTGGGATTACCAACAAAATTCCCGGCTGATATTGAATGCAGGTGATGAGGTGGTCTTCAGTTCTGACAAGAATGCTTATGTATCCTTTTACACATGTTTTGGGTGCTTCTTTGGGAAGAAATTTGACCATGTTTGCTCTATCCCTCTCACTGTCGATGATGTTGCAAGGAACTCCAATGGCTTGAAAGTCACTATGCATTACAAGGAGTTCATCTGCTTGATGGGCGCTTTGGGTCAAAGGTTGATGATGCTTGCTCTTGATCGTTTTATTTTTCAGCAGCTCACCCATAACAAGGTCACTGCTGCTGGGATACCTTGTTCTAATGATGAGGTTTCATCACAAGCTTCTGGTCATGTGGATGTTACTACTGACAGGAAGGACACCACCAATAATGGCAGTTCAGCTGAAGTTTCTGCTGAGAAAACTATCCTTGCACCCTCCGCCCCTGCCAATGAAAATTTTAATCTTGACAGCATGAAAGTGGATGTTGGGAGGTTGACAGGGGCCACTGATGAGTTAAGACCTTTGTCTTGCATGCTTGCTGGCCTGCGTTTAAAGAATATTGATCCTCAAGCTGATTTATTTTCCATCGGGCAGCAAGCATTCAAAAACGATCTGCAGCAAGGAATTCTCAATCCTGATGATATTGATGTGTCATTTGAAAACTTCCCATATTATATAAGTGATTCTACAAAAAGTGTTTTGGTTGCTTCTATGTACATTCATTTGAAGCGAAATGATTTTATAAAGTTTGCTTCAGGCCTACCTTCACTGTGCCCCCGAATATTGTTATCTGGTCCTGCAGGTTCGGAAATATATCAGGAAACCTTGTGCAAGGCTCTTGCAAAACATTTTGGTGCTAGGCTACTTATTGTGGATTCCTTTACCTTGCCTGGTGGAACACCATCAAAGGATTCTGATTCTCCTAAACAAAGTTCAAGGCCTGAAAAGGCGTATGCAAAACAAAGTGCCCAGCTTGCCACATTACAGCATAAAAAACCAACTTCAAGTGTCAATGCTGATCTTATTGATGGATCCTCATCAAGTTCTCATGTTATGCTGAAGCAGGAGGTATCTACTGCATTGTCCAAAGGCCCTATGCTTAAAACAGGTGACCGAGTAAAATTTGTTGGCAACCTTCCCTCTGCAGCCTCTTCATTAAAAATTTATCCTTCAAGGCAAGTTGAGTTATTGGAGATGCTTATTAATTTCATGAGTCATATCTTTGTTTTCTTTGTTCTTGCGGGAAGCCCTCAAGTTTCATCATTCGATAAACCAATTCCAGATGGAAATGATCTTGGAGGCCTATGTGAAGATGATCGTGGTTTTTTTTGTTCTGCTAATCATTTACAACCAGTGGATAAATTTGGGGGGGATGAAACTATCAAGCTTGCTATTAACGGAATCTTTGAGGTTGTTTTTTCCCTGAGTAAAAGTGGTGGGTTGGTGTTGTTCTTGAAAGATATAGAGAAGGCTATGATTGGGAACTCAGAAGTCTTAAAAAGCAGACTTGAAAGTTTGCCACGAAATGTAGTTGTAATTGGTTCACATACTCCGCAGGGCAATCATAAGGACAAGATCCAGCCTGGTAGCCATTCGTTTACAGAATTTGAGAGCACTCTGGCAGCTTTATCTGTTGTTCTTGCTCGTCCGGATAAACTTAGTAGATTGCATGATAGGAGCAAGGAAACCGCCGATGCGATGAAGCAACTTAGACTTCTTTTTCCCAACGAAGTAACAATACAACCGCCTCAGGATGAGGCTTTGCTCTCTTATTGGAAGCAGCAGTTAGAACATGACATTGAAACTATGAACGCTCAGTCAAATATTGTCTGCATTCGCACAGTTCTTGACAAGATTGGATTTATGTGCCCTGATCTTGAAAATCTGTGTGTTAAAGATCAAACCCTAACAACTGAAATTGTGGGGAAAATTGTTGGTTGGGCATTAAGTTACCAGCTAATGCATTCATCTGAAGACTCAATCAAAGACTCTAAGATGTTGTCTACTGAAAGCATTAAGTATGGGCTGAACATTCTACAGGGCATCAAAGGAGATAGCAAGAACTTCAAGAAATCACTGAAGGATGTGATCACTGATAATGAATTTGAAAAAAAATTGCTTGCTGATGTTATTCCTCCAAGTGACATTGGGGTCAAATTTGATGATATTGGAGCTTTAGAAAATGTGAAGGACACCTTGAATGAATTGGTCATGCTTCCCCTTCAGAGGCCTGAATTGTTTTCCAAAGGACAGTTGACAAAGCCTTGCAAGGGAGTATTGCTGTTCGGGCCCCCGGGTGTTGGAAAAACATTGCTTGCAAAGGCTGTAGCTACCGAGGCTGGAGCAAATTTCATCAACATCTCGGTCTCCAGCATTTCCTCAAAGTGGTTTGGTGAAGGAGAGAAATATGTCAAAGCAGTATTTTCTCTGGCAAGCAAAATTGCTCCTAGTGTTATTTTTGTTGATGAGGTTGATAGTTTGTTACGAAGACGTGAAAATCATGGTGAGCATGAGGGTATGCGTAAAATTAAGAATGAATTTATGGTGAATTGGGATGGTCTGCGAACAAAAGACAATGAACGCATACTTGTACTTGCTGCCACAAATAGACCCTTTGACCTTGATGAGGCTGTTATTAGAAGGTTTCCACGAAGATTGATGGTCAATTTGCCGGATGCTCCAAACAGAGTAAAAATTCTTGAAGTGATTTTAGCAAAAGAAGATTTGGCACCTGATGTCGATGTGGAAGCAATATCAAACATGACTGATGGATATTCTGGGAGTGACCTTAAGAATCTGTGTGTCACAGCAGCTTACTGTCCAATAAGAGAGATATTGGAGAAGGAAAAGAAGGAGAGAAGTTTGGCTCTGGCTGAGAACAGACCTTCACCTCCATTGTATGGCAGTACTGACAGACGGCCCTTAAAGATGGAGGATTTTAGACATGCACATGAGCAGGTATATGGCATTCATTATCCCAGATTTTCTTTTTTTGGTGGGCGCAAGCGTGTCGTCGGAGTCAAGAAATATGAACGAGCTGCTCCAATGGAATGA 3960 0.4364 MILAMTTICGPIPSDQSLSSSNSSLLSPHCRSESHYPLHINFTPGDTSLRLPTATGPELDHLFLFPPSRLAVSRVTSSQPPLFWVKRDQAQFKGANIMVETRGGSSSSKRSRSPSSSSDIKKPKVSKDSSPRSLPSAENLGPANEPGNESREKEISSSNLPHSGSLKGTDVCDATLSEQSPAMAVIEGEVLTSPQPLGETAVDGEKSKVIGAVADGESKKCSGKTSPEAAWGRLISQRSQNRHLSLCGSQFTVGHGCQCNLWLNDPAVSDVLCKLEPTKRGGSSVGLLEITGVKGSVQVNGWDYQQNSRLILNAGDEVVFSSDKNAYVSFYTCFGCFFGKKFDHVCSIPLTVDDVARNSNGLKVTMHYKEFICLMGALGQRLMMLALDRFIFQQLTHNKVTAAGIPCSNDEVSSQASGHVDVTTDRKDTTNNGSSAEVSAEKTILAPSAPANENFNLDSMKVDVGRLTGATDELRPLSCMLAGLRLKNIDPQADLFSIGQQAFKNDLQQGILNPDDIDVSFENFPYYISDSTKSVLVASMYIHLKRNDFIKFASGLPSLCPRILLSGPAGSEIYQETLCKALAKHFGARLLIVDSFTLPGGTPSKDSDSPKQSSRPEKAYAKQSAQLATLQHKKPTSSVNADLIDGSSSSSHVMLKQEVSTALSKGPMLKTGDRVKFVGNLPSAASSLKIYPSRQVELLEMLINFMSHIFVFFVLAGSPQVSSFDKPIPDGNDLGGLCEDDRGFFCSANHLQPVDKFGGDETIKLAINGIFEVVFSLSKSGGLVLFLKDIEKAMIGNSEVLKSRLESLPRNVVVIGSHTPQGNHKDKIQPGSHSFTEFESTLAALSVVLARPDKLSRLHDRSKETADAMKQLRLLFPNEVTIQPPQDEALLSYWKQQLEHDIETMNAQSNIVCIRTVLDKIGFMCPDLENLCVKDQTLTTEIVGKIVGWALSYQLMHSSEDSIKDSKMLSTESIKYGLNILQGIKGDSKNFKKSLKDVITDNEFEKKLLADVIPPSDIGVKFDDIGALENVKDTLNELVMLPLQRPELFSKGQLTKPCKGVLLFGPPGVGKTLLAKAVATEAGANFINISVSSISSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSLLRRRENHGEHEGMRKIKNEFMVNWDGLRTKDNERILVLAATNRPFDLDEAVIRRFPRRLMVNLPDAPNRVKILEVILAKEDLAPDVDVEAISNMTDGYSGSDLKNLCVTAAYCPIREILEKEKKERSLALAENRPSPPLYGSTDRRPLKMEDFRHAHEQVYGIHYPRFSFFGGRKRVVGVKKYERAAPME 1319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0437 1319 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 501 1289 - -
Acco06g0437 1319 Gene3D - 1193 1287 - -
Acco06g0437 1319 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 1019 1195 - -
Acco06g0437 1319 ProSitePatterns AAA-protein family signature. 1164 1183 IPR003960 GO:0005524|GO:0016887
Acco06g0437 1319 Gene3D - 1019 1289 IPR027417 -
Acco06g0437 1319 SMART AAA_5 1057 1194 IPR003593 GO:0016887
Acco06g0437 1319 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1020 1290 IPR027417 -
Acco06g0437 1319 SUPERFAMILY SMAD/FHA domain 230 332 IPR008984 GO:0005515
Acco06g0437 1319 MobiDBLite consensus disorder prediction 98 170 - -
Acco06g0437 1319 Pfam ATPase family associated with various cellular activities (AAA) 1061 1190 IPR003959 GO:0005524|GO:0016887
Acco06g0437 1319 Pfam AAA+ lid domain 1214 1250 IPR041569 -
Acco06g0437 1319 MobiDBLite consensus disorder prediction 414 440 - -
Acco06g0437 1319 Gene3D - 230 334 - -
Acco06g0437 1319 MobiDBLite consensus disorder prediction 601 620 - -
Acco06g0437 1319 MobiDBLite consensus disorder prediction 100 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0437 Acco-ChrAcco06 2714177 2728484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0437 1056 1261 Calmodulin-binding Proteins AT3G56690 35.238 2.01e-30 128