Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0411 ATGATTGGTTTAACAATGGCCTTCATGATTCTCCTCCTACTCCTTCCTTCATTGGCTTCTGCAGAATCTCTTTCTCCTGCAACTCTGTGCCACCAAACACCTGAACCTTCTAACTGCACATCCCTCCTTCCTCCCCAAAACACCACCATCCATGACTCTTGTCGCTTCTCTCTCCTCCATTCCTTATTGCGGGCCCACAAATTCTTGAAATCCCTCGACCTGCTTCTTCAACGGCGCTCTTCTTTGTCCGCAGTGGACGTCGCTGACCTTGAAGATTGCTGGACACTTGCCGACCTCAACGTAGATTTTCTCTCAACTTCCTTGCAAATCCTGAACAATACTGCTGGGTTTCTATCCAATTCCTTTATTGAAAGTGTTCAAACCATGCTCAGTGCTGTTTTAACCAACCATGAAACTTGCTTGGATGGCCTTCATGACACTGCTGCTTCTTCTCATCGGGGCCTGGTAATAGGAGGGCTGTCTCTCCCACTTTTTGATGACAAGAAGCTTTATAAAGTCTCTTTATCCCTTTTCACGAAGGCTTGGGTTCACACGAGTAAACAAAACCCTCAATTATCGTGGCACCAACCTCCCCGAATGCAAGTTGTATTAAAAGACGGTCATTTGCCTCTTGCCATGTCGAGCAGAATTCGTGCTATCTTCGAGGCTGCTAGTGGTAGAAAATTAAACTCATCTTTTGCAGCTCCCCACGTGGCACTTGTCAAAGACATTGTGACGGTGAGAAAAGATGGAAGAGGCAACTTCACCACCATCAATGACGCCCTCTCTGCAGCTCCCAACAAAAGTTCCTCTTCCAAAGGCTACTTTTTGATCTATGTTGCAGGTGGAGTTTACGAAGAATACGTCTCCATGGATAAGAAAAAGACCTACTTGATGATGATTGGCGATGGTATCAACAGGACTATCATTACGGGCAATCGCAGCCATGGAGACGGGTGTCAAACCTTCAGATCTGCAACATTTGTTGTACACGGGAAGGGATTCGTCGGAGTGAATATAACATTCCGTAACACAGCAGGGCCGGAGAAGCACCAAGCGGTGGCAGTGAGAAACTCAGCAAACTTGTCTGCATTTTATAGCTGCAGTTTCGAGGGATACCAAGATACACTCTACGCACATTCCATGAAGCAGTTCTACAGAGATTGTGATATATACGGCACAGTGGATTTCATATGCGGGAATGCGGCAGCGGTGTTTCAGAATTGCAACATTTATGTTCTTAAACCCATGATGAAACAATTCAATTCCATCACAGCACAGAGTCGAGATAGCCACGATCAAAGTACAGGCTTCTCAATACATAACTGCACAATTAGAGCCGCGGAGGATCTGACGGGTACAAAGACGTACCTGGGAAGGCCGTGGAAGCCATTGTCCAGGACAGTTTACATGGAGAGCTTCATGAATAACATCATAGATAGTGCTGGTTGGCGTGTGTGGGAGAATGATAAAGAGAGTAACTTGAGCAGCTTGTATTACGCAGAATATAATAATTCGGGGCCCGGCTCCAACACCTCGCATCGAGTCTTGTGGAACGGTTATCATGTCATCAAATATTCAATTGCTGTTAATTTCACCATCTCCAAGTTCTTATCAGGGGATGATTGGTTGCCCCGCACTGGCGTCCCCTTCACTAGTCACTTGATCAACTCATGA 1677 0.4603 MIGLTMAFMILLLLLPSLASAESLSPATLCHQTPEPSNCTSLLPPQNTTIHDSCRFSLLHSLLRAHKFLKSLDLLLQRRSSLSAVDVADLEDCWTLADLNVDFLSTSLQILNNTAGFLSNSFIESVQTMLSAVLTNHETCLDGLHDTAASSHRGLVIGGLSLPLFDDKKLYKVSLSLFTKAWVHTSKQNPQLSWHQPPRMQVVLKDGHLPLAMSSRIRAIFEAASGRKLNSSFAAPHVALVKDIVTVRKDGRGNFTTINDALSAAPNKSSSSKGYFLIYVAGGVYEEYVSMDKKKTYLMMIGDGINRTIITGNRSHGDGCQTFRSATFVVHGKGFVGVNITFRNTAGPEKHQAVAVRNSANLSAFYSCSFEGYQDTLYAHSMKQFYRDCDIYGTVDFICGNAAAVFQNCNIYVLKPMMKQFNSITAQSRDSHDQSTGFSIHNCTIRAAEDLTGTKTYLGRPWKPLSRTVYMESFMNNIIDSAGWRVWENDKESNLSSLYYAEYNNSGPGSNTSHRVLWNGYHVIKYSIAVNFTISKFLSGDDWLPRTGVPFTSHLINS 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0411 558 SMART PMEI_2 21 177 IPR006501 GO:0004857
Acco06g0411 558 Pfam Plant invertase/pectin methylesterase inhibitor 27 153 IPR006501 GO:0004857
Acco06g0411 558 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 28 180 IPR035513 -
Acco06g0411 558 CDD PMEI-like_3 28 182 - -
Acco06g0411 558 PANTHER PECTINESTERASE 15 545 - -
Acco06g0411 558 NCBIfam pectinesterase inhibitor domain 6 148 IPR006501 GO:0004857
Acco06g0411 558 Gene3D - 238 555 IPR012334 -
Acco06g0411 558 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 179 IPR035513 -
Acco06g0411 558 Pfam Pectinesterase 245 541 IPR000070 GO:0030599|GO:0042545
Acco06g0411 558 SUPERFAMILY Pectin lyase-like 241 553 IPR011050 -
Acco06g0411 558 FunFam Pectinesterase 238 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0411 Acco-ChrAcco06 2567652 2569414 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0411 1 556 Carbohydrate Esterase AT4G02330 51.215 0.0 570