Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0409 ATGGCTTTCAAGATCAAGTCTCATGTTAGTTTTACAAGCTCCCTCTACCTTCTGCTTTCCTTATTCGCAGTGATATCTCTAGCAGATAACCCAGCGGCCACCACCATAACCCATCCAGACACAGTTTGTGAAACCACCAGGTACCCTCCCCTGTGCAAAACCCTGCTTGGTAATCAAAACGGTAACGTCTTTGACTTTGGCCGCATTTTGCTTCGAAAGTCTTTATCCCAGTCTCGCCGATTCTTGAACCAGCTGGATTCCTATCTGCAATCTTCGTCCTCTCTGTCTCAGCCCACCATTGGAGCTCTCGAGGACTGTCGCTTCCTCGCTGGCCTCAACTTCGACTACTTATCCGACGCCCTGGACGCTGTGCAGAATCTCAATGATTTCCTGTCTTCCTCTCAAGCCCAAGACCTTCAAACCGTATTCAGTGCCGTCCTGACCAATCAGCAAACATGTCAGGATGGCCTACAAACCACTGCTTCGGATGGGAGAGCAAAGGACGATACTTCTTCCGTACTATCCGACGACACGAAGCTTCACAGCGTGTCTCTTGCTCTCTTCACCAAAGGTTGGGTGCCCAAGAAGAATATCATAACCTCATGGCCAAACAATGGGGTGCATTTGGATTTCAGCCATGGTCGTTTGCCTTTGAAAATGTCTCCCCGAGTAGAGGCTATTTTCAACTCCTCAAAAAGCCACGGCAGGAAACTACTCCAGTCGGACCAAAGTGTGGTGATCACCGATATTGTGGTTGTCAGTCAGGATGGAAGCGGAAACTTCACCACCATCAACGACGCCATCAGCGCCGCCCCTAACAACACAGCTTCCGGTGCCGGTTACTTTTTAGTATACATTACCAAGGGTGTCTACCAAGAATACGTATCCATACCCAAAAACAAAAAGTACTTGATGTTATTGGGAGACGGCATCAACAGCACCATCATCACCGGCGACCACAACGTCGTCGACAATTATACAACATTCAACTCAGCGACATTTGCCGTGGTGGCACAAGGATTCGTGGCGGTGAGCATTACATTCCGTAACACGGCGGGGCCGGGCAAACACCAAGCCGTTGCCGTGAGGAACGGAGCGGACCTGTCCGCGTTCTACAGCTGCAGCTTCGAAGGATACCAAGACACTCTGTACGCACATTCTCTGAGACAATTCTACAGAGAATGTGACATATACGGAACCGTGGACTTCATATTCGGGAACGCAGCCTTGGTTATGCAAAACTGCAACCTGTATCCCCGGCTTCCGTTGAGCGGTCAGTTCAACGCGATCACGGCACAGGGTCGAACGGACCCCAATCAGAATACAGGCACGTCCATTCAGAACGCGACCATAAAGGCGGCAGACGATTTAGCTCCGTGGGTAGGGACGGTGCTGACGTATCTGGGGAGGCCATGGAAGGAGTACTCGAGGACGGTATTTATGGAGTCATGGATGGACAGTCTCATCAATCCTGCAGGGTGGCAGGTGTGGGACGGCACCTTTGCTTTGAGCACGTTGTACTACTCAGAGTACAACAACAGTGGGCCCGGTGCTGACACGAGCAACAGGGTGACGTGGCCAGGTTACCACGTCATCAATGCGACGGATGCGGCTAATTTCACGGTGTCCAACTTCTTGATCGGGGATACTTGGTTGAATCAAACTGGGGTCCCATACTCCCCCGGACTTTGA 1692 0.5118 MAFKIKSHVSFTSSLYLLLSLFAVISLADNPAATTITHPDTVCETTRYPPLCKTLLGNQNGNVFDFGRILLRKSLSQSRRFLNQLDSYLQSSSSLSQPTIGALEDCRFLAGLNFDYLSDALDAVQNLNDFLSSSQAQDLQTVFSAVLTNQQTCQDGLQTTASDGRAKDDTSSVLSDDTKLHSVSLALFTKGWVPKKNIITSWPNNGVHLDFSHGRLPLKMSPRVEAIFNSSKSHGRKLLQSDQSVVITDIVVVSQDGSGNFTTINDAISAAPNNTASGAGYFLVYITKGVYQEYVSIPKNKKYLMLLGDGINSTIITGDHNVVDNYTTFNSATFAVVAQGFVAVSITFRNTAGPGKHQAVAVRNGADLSAFYSCSFEGYQDTLYAHSLRQFYRECDIYGTVDFIFGNAALVMQNCNLYPRLPLSGQFNAITAQGRTDPNQNTGTSIQNATIKAADDLAPWVGTVLTYLGRPWKEYSRTVFMESWMDSLINPAGWQVWDGTFALSTLYYSEYNNSGPGADTSNRVTWPGYHVINATDAANFTVSNFLIGDTWLNQTGVPYSPGL 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0409 563 CDD PMEI-like_3 41 192 - -
Acco06g0409 563 NCBIfam pectinesterase inhibitor domain 13 188 IPR006501 GO:0004857
Acco06g0409 563 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 190 IPR035513 -
Acco06g0409 563 PANTHER PECTINESTERASE 24 553 - -
Acco06g0409 563 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 190 IPR035513 -
Acco06g0409 563 FunFam Pectinesterase 244 563 - -
Acco06g0409 563 Pfam Pectinesterase 251 549 IPR000070 GO:0030599|GO:0042545
Acco06g0409 563 Pfam Plant invertase/pectin methylesterase inhibitor 40 187 IPR006501 GO:0004857
Acco06g0409 563 Gene3D - 245 563 IPR012334 -
Acco06g0409 563 SMART PMEI_2 34 187 IPR006501 GO:0004857
Acco06g0409 563 ProSitePatterns Pectinesterase signature 2. 397 406 IPR033131 -
Acco06g0409 563 FunFam Pectinesterase 40 190 - -
Acco06g0409 563 SUPERFAMILY Pectin lyase-like 247 562 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0409 Acco-ChrAcco06 2553304 2555092 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0409 15 563 Carbohydrate Esterase AT1G02810 57.639 0.0 650