Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0408 ATGTCCACCATGCAGCACCACAAGAGAAGAACACTCTCATCGGCCCTTGTTTCTCTACTCTTGCTACTTGTGGAAGCAACAGAGCCACAAGAAACAACACACCTGCATTTTCACAAACACCTTCAGGCAGCTCACTCCACCTGCCAAGGAACACTCTACCCTGACCTATGTGTCTCCACGCTGGCATCCTTCCCGGATCTTACCTCTAAATCTGTTCCCCAAGTCATACGTTCCCTCATCAACCACACCATGTACGAGGTCAGATCCTCGTCCTCCAACTGTACTGGTCTCAAAAGAAAGCTCCGAAATCTGAACCCGCTTCAAAAAAGAGCTCTCGATGACTGCCTCCAACTTTTTGATCACACTCAGGAGGAGTTCAAAACCAGCATGGCCGATCTCTCCTATACAAAGATCGATTCCAAGCGCTACCACGACTCACAGACTCTGCTGAGCGGCGCATTGACCAATGTTTACACGTGCCTCGACGGCTTTGCCAACGGCGACACCAATGGACACGTGAGACATATCATCCAGAACAACTTGTATCGGATTTGCCACCACGTTAGTAACTCATTGGCCATGCTCAACAAAGTGAAAACGGGTGTGAAGAACCAGTCTCCGTCCGAGGCATTCAAAATGAGGCATAATGGCTTCCCATCTTGGCTAACCTCCAAAGACAGAAGGCTTCTTCAAGCTGCTGTTAATGAAACCAAGTTCGATCTCGTGGTGGCCAAAGATGGCTCCGGCAATTTCACCACCATCGGGGAAGCAGTAGCTGCCGCCCCAAACTCCACCACAACCAGGTTTGTGATACACATCAAGGCTGGGGCATACTTTGAGAATGTGGAGGTGATAAAGAAAAAGAAGAATGTGATGTTCGTTGGAGATGGGATCGAGAAGACGATAGTGAAGGCCAGTAGAAATGTGGTGGATGGGTGGACCACCTTTCAATCCGCTACTGTAGCGGTGGTAGGGGACGGATTCATAGCGAAGGGGATAACCATAGAGAACTCGGCGGGGCCCAGCAAGCACCAGGCGGTGGCTCTCAGGAACGGCGCTGACCTGTCGGCCTTCTACCAATGCAGCTTCGTCGGCTACCAGGATACCCTCTACGTCCATTCCCTCCGTCAGTTCTACCGGGAATGCGACATCTACGGCACCGTCGACTTCATCTTCGGCAACGCTGCCGCCGTGCTCCAGAACTGTAACCTGTACGCGCGGAAGCCCAACGACAACCAGAAGAACCTGTTCACGGCCCAAGGCAGAGAGGACCCGAACCAGAACACAGGCATTTCCATCATAAACTCCAAGGTGGCGGCGGCGTCGGACTTAATCCCGGTGAAGTCATCGTTCCCAACGTACCTGGGGAGGCCATGGAAATTGTACTCGAGGACGGTGTATTTGGGTTGCTACATGGAGGATTTGATAAATCCGGCAGGGTGGTTGGAATGGAACGGGTCGTTTGCACTGGATACTCTGTACTACGGGGAGTACAAGAACAGGGGTCCAGGTTCCAATACGAGCGGGAGGGTGACGTGGAAAGGTTACAGGGTGATCAATTCCTCCACGGAGGCTTCACAGTTCACTGTTGCCCAGTTCATTCAAGGCTCCGACTGGTTGAATTCCACCGGTGTTCCTTTCTTCCCTGGTCTCAGCCCCTGA 1662 0.5223 MSTMQHHKRRTLSSALVSLLLLLVEATEPQETTHLHFHKHLQAAHSTCQGTLYPDLCVSTLASFPDLTSKSVPQVIRSLINHTMYEVRSSSSNCTGLKRKLRNLNPLQKRALDDCLQLFDHTQEEFKTSMADLSYTKIDSKRYHDSQTLLSGALTNVYTCLDGFANGDTNGHVRHIIQNNLYRICHHVSNSLAMLNKVKTGVKNQSPSEAFKMRHNGFPSWLTSKDRRLLQAAVNETKFDLVVAKDGSGNFTTIGEAVAAAPNSTTTRFVIHIKAGAYFENVEVIKKKKNVMFVGDGIEKTIVKASRNVVDGWTTFQSATVAVVGDGFIAKGITIENSAGPSKHQAVALRNGADLSAFYQCSFVGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVLQNCNLYARKPNDNQKNLFTAQGREDPNQNTGISIINSKVAAASDLIPVKSSFPTYLGRPWKLYSRTVYLGCYMEDLINPAGWLEWNGSFALDTLYYGEYKNRGPGSNTSGRVTWKGYRVINSSTEASQFTVAQFIQGSDWLNSTGVPFFPGLSP 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0408 553 SUPERFAMILY Pectin lyase-like 238 550 IPR011050 -
Acco06g0408 553 PANTHER PECTINESTERASE 19 541 - -
Acco06g0408 553 NCBIfam pectinesterase inhibitor domain 13 179 IPR006501 GO:0004857
Acco06g0408 553 Gene3D - 234 551 IPR012334 -
Acco06g0408 553 Gene3D Invertase/pectin methylesterase inhibitor family protein 42 200 IPR035513 -
Acco06g0408 553 Pfam Plant invertase/pectin methylesterase inhibitor 45 194 IPR006501 GO:0004857
Acco06g0408 553 CDD PMEI-like_3 46 197 - -
Acco06g0408 553 FunFam Pectinesterase 234 551 - -
Acco06g0408 553 Pfam Pectinesterase 240 536 IPR000070 GO:0030599|GO:0042545
Acco06g0408 553 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 45 197 IPR035513 -
Acco06g0408 553 ProSitePatterns Pectinesterase signature 2. 384 393 IPR033131 -
Acco06g0408 553 SMART PMEI_2 39 194 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0408 Acco-ChrAcco06 2541082 2544563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0408 68 547 Carbohydrate Esterase AT4G02320 52.342 0.0 534