Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0386 ATGTGTCACCACATACGAGTGGGCATATTACTTATTCCCTACGAGACTACCCATCCACTGTGGAAGCTCTATAAATTAAATGCCGTCATTACACTCTCTGAGGCTGAGACAGAAAGAGAGAGAGCGATGGGAAGAGCACCATGCTGTGAGAAAGTGGGACTGAAAAAAGGTAGATGGAGTGCCGAAGAGGATGAAATGTTGAGCAAGTACATTGAGGTCAATGGCGAAGGTTCTTGGAGGTCCTTGCCCAAGAATGCTGGACTTTTGAGGTGTGGCAAGAGTTGCAGGCTGAGATGGATCAACTACCTGAGATCTGACCTTAGGAGGGGCAACATTACTCCTCACGAGGAAGACCTCATAATTCAACTCCATTCTTCTTTGGGCAACAGGTGGTCCCAGATAGCGAGTCACTTGCCAGGAAGAACAGACAACGAAATTAAAAACTACTGGAATTCTCACTTGAGCAGGAAAATCTACGCCTTCAGGAAACCGGCTAGTACGGATCAGAGCACCGCAGACGACACTGTGGTGACGGCCAATGCAAACAATAATATTACCAAGCGCAAGCGTGGCAGAACCAGCCGTTGGGCCATGAAGAAGAACAGGAGCAACAACACCAAACGAGAGGGTACGGAGGAAGTCAATCATCATCAGAGCAACAGTGTGGCAGCAGTTCCGGAGCCACACACACCGGCACTAGAGAACGAAGACTTGTCCATTACAGGCGATGGCATAGACTTTGAGGATTTCATAGTGCTGGAAGGTGACAATGATAATAGTACAGAAAACAAAGTAGCGGAGAGATCAGGGGATGAAGGCGGAGAAAAGGGAGATGGTAGGTTGACGCCAGGTGAAGGCAAGGAAACAAGAGAGATGACCACACAAGAAGAGGTTATTGATGAGCTAGGCATTGATGGCGGTGGGGAATTATGTCTTGACGACATGTTGGACACTTGGTTGCTGGAAGCCGACGGAGGTGGGGTTTCCAGTATAACTGAGGAGAGAGAAAGAAACGATGACGTGTCGTGTTTTGGTTCAAAAAAGGCTTCAGCAGATCACCCAGATCAGTGTACTGATAATAATACTCAGCACTGCCATTCTTGCTCTCCCTTGCCTGAATACGATTACTGGCATAATTGGGAGATTAATATGGACGACCAGTTGATGATGAATCATGATGATTACCCGTCGCACACATGGGACAACGACAATCAAGATCTCTTGTCTTGGCAATGGGAAGACGATGATTGTCAGATTCATCCTCGCAAACAAAATCCCAAGCTGCCCTTTATTCTTTCTTGA 1302 0.4716 MCHHIRVGILLIPYETTHPLWKLYKLNAVITLSEAETERERAMGRAPCCEKVGLKKGRWSAEEDEMLSKYIEVNGEGSWRSLPKNAGLLRCGKSCRLRWINYLRSDLRRGNITPHEEDLIIQLHSSLGNRWSQIASHLPGRTDNEIKNYWNSHLSRKIYAFRKPASTDQSTADDTVVTANANNNITKRKRGRTSRWAMKKNRSNNTKREGTEEVNHHQSNSVAAVPEPHTPALENEDLSITGDGIDFEDFIVLEGDNDNSTENKVAERSGDEGGEKGDGRLTPGEGKETREMTTQEEVIDELGIDGGGELCLDDMLDTWLLEADGGGVSSITEERERNDDVSCFGSKKASADHPDQCTDNNTQHCHSCSPLPEYDYWHNWEINMDDQLMMNHDDYPSHTWDNDNQDLLSWQWEDDDCQIHPRKQNPKLPFILS 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0386 433 ProSiteProfiles Myb-like domain profile. 104 154 IPR001005 -
Acco06g0386 433 Gene3D - 113 158 - -
Acco06g0386 433 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 51 103 IPR017930 -
Acco06g0386 433 MobiDBLite consensus disorder prediction 254 293 - -
Acco06g0386 433 ProSiteProfiles Myb-like domain profile. 51 103 IPR001005 -
Acco06g0386 433 MobiDBLite consensus disorder prediction 260 293 - -
Acco06g0386 433 MobiDBLite consensus disorder prediction 187 224 - -
Acco06g0386 433 FunFam Myb transcription factor 53 131 - -
Acco06g0386 433 Gene3D - 55 108 - -
Acco06g0386 433 CDD SANT 58 103 IPR001005 -
Acco06g0386 433 CDD SANT 113 154 IPR001005 -
Acco06g0386 433 SMART sant 108 156 IPR001005 -
Acco06g0386 433 SMART sant 55 105 IPR001005 -
Acco06g0386 433 SUPERFAMILY Homeodomain-like 53 150 IPR009057 -
Acco06g0386 433 Pfam Myb-like DNA-binding domain 56 103 IPR001005 -
Acco06g0386 433 Pfam Myb-like DNA-binding domain 109 154 IPR001005 -
Acco06g0386 433 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 104 158 IPR017930 -
Acco06g0386 433 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 43 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0386 Acco-ChrAcco06 2409270 2411463 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0386 43 199 MYB Transcription Factor Family AT2G47460 70.988 2.16e-74 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco06g0386 Myb_DNA-binding 3.4e-11 CL0123