Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0360 ATGCATGACAATGGACGGACCGGATGTTCCCTGATTCCTTCGCCAACACTACTGGTTCCAGATAACACTTCTTGTAATCAACCATTGCAATTTTTTGCTTTCACCCAAACTAAAGATAAAAAGGAAAGAAAGGCACTGTACGCTACTATGGATGGTACTGCCTCCCCTAAACTTGAGTCAGAAGATTCTACAGCTCTCACCCCAGGAAGTCAGGAGTCCAAAAAAAGGAAAATGGTTCAGAAAACAGTTGTGAGGGTGAAAGTTGGAGAAAATGTTAGTAAACTGAAGAATGAAGGGCTACCATCGGACTCATGGTCTTGGAGGAAATATGGACAAAAGCCTATTAAAGGATCTCCTCATCCAAGAGGCTACTACAAGTGCAGCACATCGAAAGGTTGTTCGGCCAAGAAGCAAATAGAGAGATGCAGAACAGAGGCTTCAATGCTCATTGTCACCTATACTTCTTCCCATAACCATCCAGCTCCAGAATTACCCTTCAAAGAATCAAAAACTCAAGCTACTGAAGATCCCTCACCTGATACTTTAAAGGCAAAAGACCAAGAGCAAGAGGAAGAGAAGAAAGAACTTCAACTTGCAAAAGCTAACGATCAAGGTACAAATGAAGAAAATTTTCATTACCTGCTATCCCCAATAGGATGTTCTGAAGATATTATTATTGATGACCAAGAGGATGTTTTCAAATTGAATCCGGAGAAAATGCAAGAGAGGATAGATCCTCTTTTAGAAGTAGAGCCCCTCTGTTATTCTCAGCTGAAGGACCTCTCAACGCTCAAATCGGAGGAACTCGACTACTTCGACGAGCTTGAAGAGCTACCCATGTCTCCATCTTTGCTGAACTTGATGAGGAACAACTTTTCCAACGAAAGGATTCCGGTGGCCCCGTCATGA 909 0.4246 MHDNGRTGCSLIPSPTLLVPDNTSCNQPLQFFAFTQTKDKKERKALYATMDGTASPKLESEDSTALTPGSQESKKRKMVQKTVVRVKVGENVSKLKNEGLPSDSWSWRKYGQKPIKGSPHPRGYYKCSTSKGCSAKKQIERCRTEASMLIVTYTSSHNHPAPELPFKESKTQATEDPSPDTLKAKDQEQEEEKKELQLAKANDQGTNEENFHYLLSPIGCSEDIIIDDQEDVFKLNPEKMQERIDPLLEVEPLCYSQLKDLSTLKSEELDYFDELEELPMSPSLLNLMRNNFSNERIPVAPS 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0360 302 Pfam WRKY DNA -binding domain 103 160 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco06g0360 302 SUPERFAMILY WRKY DNA-binding domain 98 162 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco06g0360 302 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 44 281 IPR044810 GO:0003700
Acco06g0360 302 MobiDBLite consensus disorder prediction 56 73 - -
Acco06g0360 302 Gene3D WRKY domain 86 163 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco06g0360 302 Coils Coil 182 204 - -
Acco06g0360 302 ProSiteProfiles WRKY domain profile. 96 162 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco06g0360 302 MobiDBLite consensus disorder prediction 169 199 - -
Acco06g0360 302 MobiDBLite consensus disorder prediction 156 205 - -
Acco06g0360 302 MobiDBLite consensus disorder prediction 50 80 - -
Acco06g0360 302 SMART WRKY_cls 101 161 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco06g0360 302 FunFam WRKY transcription factor 65 75 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0360 Acco-ChrAcco06 2272253 2274138 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0360 70 162 WRKY Transcription Factor Family AT4G01250 59.140 6.02e-33 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco06g0360 WRKY 1.2e-23 CL0274