Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0350 ATGGCGAGTTCTCAAATGTCAGGGGAGCCTCACGTTGGAGATGAGAACACGAATAAGAATAAAAGATTTGGAGAAATAGAAGAAGTCATAGATGATTTGGAGAGGGCTTTTGTGAGTTTGGAGAACTTCGAAATCCTTAAGGATGCGCCACAGGATCACTCTTTCCTGTCCAAGAAGACGACCAACAGAAGACGAAATCTCATGGAAACGATGAAGGCAGAATGCGAGGTCTTGAAGCTTTGTCTCGCCGGCACTTCCATTTACGTCAGAGCATACGAGGAGAGGCCTGATCTCATGCGAGCCATTGTTGTAGGCCCTGAGGAAACCCCTTACCATCTCGCTTTGCTCTGCTTTGATATTCGCTTCCCTTCCAAGTATCCCACCATACCCCCTGAGTTTTCCTATCACTCCTATAACAATAATAATCACTCCTCTTCCCATTATCCCAATTCTAACATTAATGCAGAGCTTAAGCATTTTTTTAATCTCAAAATGAAATCTTGTTCTACCCCTTTGAAAATACTGCAGCTTCTCACTCTCACCCAAACCTGCTTTCTTGTTCACAAACCGAATCAGACTGTGAGTGTTCCTTCCGGTGGACAAGGACCTGACACGACAGAGATGAAGCACATCTGGGAGGCCATGCTCTGCATGTTGAAATCGCCGCCTCAGAATTTTGAAACGTTCGTCGCAGGATACTTTCGCACCAGGGCCCACCAGATTCTCATGAACTATAAATCCCATATACGTCTTGATGAAACAACGATAGGTCTGTTCTACAGACTCCTTAGAGCGTTTGAAGACAATGGAACTTATTGTAAACATCACTGCACCGAGGAATATTTTGACCTATTGCGTCTCCAAGAGACGCTGCCTCTACCTCGGCAGAAATCTGCCAACTCTGGATACTTTTGTAGCTTGCTTTTCAGCATTATGTTTTCTACCTGGAACGACACCATCGTGGTGAATCCATTGAAATTCAAATTACAGCTTTACTGTCACCAGTGCCAAGATGAGAATGAATGGGATTATATAGAGAGAAGCAAAATTCAAAGGTTATGGTGTCGGCGTGTCGCATCTTCTTACGCCCGTGAAGGAAAAGATTCTGGAACATGTTCTTCCTGTAACCTCAGCTGCTCAGTTTCTTCACAGCCTCTCCCTGTTTCCATGTCTTTGAAAGGTCAGCTTCCAGAAGCTGGTCAACAAGACAGAAATTCGTCATCGTACGGATACCTGTGGAGCAAGGTGGTGACAGGGCGAGGCATGAAGCACAAGGCTAGGAGGGTTTTGATGAAGAGAAGGCCTCGCGTGATACAAGGTTCTAGAAGACGAGGGGCCATGGGGATTAGCACGAGGATCAGAACTTTGAAGAGGCTTATACCCAGAAAGAACAGCGAGTCCGTGGGGTTGGAAGGGCTCTTCAGGGATACCGCCGACTACATTCTGTCGTTACAAACGAGGGTGAGGGTCATGCAGATTATGGTTGACGTATTGACAGCTTCTGATGAGTGA 1512 0.459 MASSQMSGEPHVGDENTNKNKRFGEIEEVIDDLERAFVSLENFEILKDAPQDHSFLSKKTTNRRRNLMETMKAECEVLKLCLAGTSIYVRAYEERPDLMRAIVVGPEETPYHLALLCFDIRFPSKYPTIPPEFSYHSYNNNNHSSSHYPNSNINAELKHFFNLKMKSCSTPLKILQLLTLTQTCFLVHKPNQTVSVPSGGQGPDTTEMKHIWEAMLCMLKSPPQNFETFVAGYFRTRAHQILMNYKSHIRLDETTIGLFYRLLRAFEDNGTYCKHHCTEEYFDLLRLQETLPLPRQKSANSGYFCSLLFSIMFSTWNDTIVVNPLKFKLQLYCHQCQDENEWDYIERSKIQRLWCRRVASSYAREGKDSGTCSSCNLSCSVSSQPLPVSMSLKGQLPEAGQQDRNSSSYGYLWSKVVTGRGMKHKARRVLMKRRPRVIQGSRRRGAMGISTRIRTLKRLIPRKNSESVGLEGLFRDTADYILSLQTRVRVMQIMVDVLTASDE 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0350 503 Pfam Ubiquitin-conjugating enzyme 94 147 IPR000608 -
Acco06g0350 503 MobiDBLite consensus disorder prediction 1 20 - -
Acco06g0350 503 SUPERFAMILY UBC-like 79 142 IPR016135 -
Acco06g0350 503 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 30 150 - -
Acco06g0350 503 CDD bHLH_AtIBH1_like 441 495 IPR044549 GO:0006355
Acco06g0350 503 Gene3D Ubiquitin Conjugating Enzyme 32 275 IPR016135 -
Acco06g0350 503 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 61 235 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0350 Acco-ChrAcco06 2206581 2214710 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0350 423 502 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G47270 48.193 1.55e-16 73.6