Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0349 ATGGAGAAGAAAGAGATGGGTGGTGTCAAGACGGAGGAAACAGTTGGATCCTCTTCGTTTGGGGATTATAATTCAAACGGTTTCCCACTTTCCAACGTCTTTGATTTTCATGAAGTCGAAAGGAGCTCTTTAGGGTTTATGGAGTTACTGGGCGTGCAGGGACCGGACCATGGTTCTTTCCTGTATTTGCCCCAGCACCTATTTCCTTCTCACCTCAACAATCAATGTGCCGCTGCAAATAACTACTGCGAGCCGTTGAATCAACAGCCCGCCACTCCAAACTCTTCATCCATTTCATCTGCGTCCAGCGAGGCAGTGATGGATGAACACACTAAAACTGTAGATCAGCGAGCAGATAAGCGACCAAACACCAAGAACCAGTTGAAGGCCAAGAAGACAAATCAGAAGAAACAGAGGGAACCGAGATTCGCGTTCATGACGAAAAGCGAGGTCGATCATCTGGATGATGGGTACAGGTGGAGAAAGTACGGTCAAAAAGCAGTGAAGAACAGCCCCTTTCCCAGAAGCTACTATCGTTGCACCAGTGCTTCATGTAATGTGAAGAAAAGAGTGGAACGATCCTTCACTGATCCAAACATTGTTGTCACGACCTACGAAGGCCAACACACACATCCAAGCCCACTCATGCCTCGTAATTCCGCTATCGCCGGAGCTTTGGCGCCAGCGGTGGTCTCCGCCGGATGTGGTTCAGGAAACTTATCCCAGCAGTATCTTCATGAGCAGCTCCCACATCATGATCATCATTTCCTTGCTAACACATTGTCGTCTTTGGGTTTTCCTCGCATTTGTGGTTCAAAGAGTAATATTGCCGCTTTTCCTCTTGACAGAATGCCTTGTAATCTAGGGACCAGTGCTTTTTTAAGGGACCATGGCCTTCTCCAAGATATTATTCCTTCCCATATGCTGAAAGAAGAGTAG 939 0.4728 MEKKEMGGVKTEETVGSSSFGDYNSNGFPLSNVFDFHEVERSSLGFMELLGVQGPDHGSFLYLPQHLFPSHLNNQCAAANNYCEPLNQQPATPNSSSISSASSEAVMDEHTKTVDQRADKRPNTKNQLKAKKTNQKKQREPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPFPRSYYRCTSASCNVKKRVERSFTDPNIVVTTYEGQHTHPSPLMPRNSAIAGALAPAVVSAGCGSGNLSQQYLHEQLPHHDHHFLANTLSSLGFPRICGSKSNIAAFPLDRMPCNLGTSAFLRDHGLLQDIIPSHMLKEE 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0349 312 MobiDBLite consensus disorder prediction 1 21 - -
Acco06g0349 312 MobiDBLite consensus disorder prediction 108 126 - -
Acco06g0349 312 MobiDBLite consensus disorder prediction 87 107 - -
Acco06g0349 312 MobiDBLite consensus disorder prediction 87 139 - -
Acco06g0349 312 Pfam WRKY DNA -binding domain 155 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco06g0349 312 SUPERFAMILY WRKY DNA-binding domain 146 214 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco06g0349 312 Gene3D WRKY domain 138 215 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco06g0349 312 ProSiteProfiles WRKY domain profile. 149 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco06g0349 312 SMART WRKY_cls 154 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco06g0349 312 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 87 239 IPR044810 GO:0003700
Acco06g0349 312 FunFam WRKY transcription factor 57 140 214 - -
Acco06g0349 312 PIRSF WRKY_txn_fact_IIc 1 312 IPR017396 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0349 Acco-ChrAcco06 2192613 2193983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0349 20 312 WRKY Transcription Factor Family AT2G47260 44.160 4.97e-67 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco06g0349 WRKY 7.4e-27 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g0403 02 2955814 2957355 Acco06g0349 06 2192613 2193983 CCT
Acco06g0349 06 2192613 2193983 Acco06g0349 06 2192613 2193983 ECH