Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0343 ATGACATCCACTATTCAGTCTCTAAAACTGCAGCAGATATCTGAAAGACAGTTGTTATATTCACGTTCGAGCGATAACTGTTTTGGAAGAAGTACTGAGTGTAGAGGGAAGGTGGCTTTGGTGGGGGTTGAAAAACGGAAGCTGATTCTACTGTGAAAAAGATCGACGGACATCATGGAGATCTTCATGGAGGAGGTAGAGATCAACGGATATGGCAGTTGGAATTGGTTGGGCGAGAAAACATGTGGTACGTCTGGTCCATTCGAGAGGCAGCGATGGTGGCATACAGCTTTGAGATGGAGAGGCAGCGATGCATGGCATGACAGAGTCTCAATTGGTTTGAAGGAAATGCGCATTGCAAAGAGATGCAACTTTGTTTGGGGTCCCATGCGTACGGATTATGAGAATTGGATTTCGTGGAACCTCCATAATTACCACAAGGCCACTCAATGGAATGCTAAAGCCCCTGATGATGTTCTGAAGCTGCGGATGGCTGAGACTAACAGAGTTAATATCACAGCTCGCCAGGACTCTACCGGTGACTTCAGCACCATCACACAAGCGCTGGACAGCATTCCACCACGCAACACCAGAAGAGTTATAATTTCCATTGGCCCGGGCGTTTACAGGGAGAAGATTGTGATACCCAGAAATAAGCACTTCATAACATTGTTGGGGGACGCCAAAAATCCGCCAACAATTACAGGGAACGATACGGCATCCATCATTGGAAGGGATGGGATGCCATTAGGAACATTCCGCAGTGCTACCGTTGCCGTGGATGCCAATTATTTTATCGCCGTCAACATCAGATTTGAGAACACGGCATGGCATGAGGTGGGAAAGGCAGGAGGACAAGCGGTGGCGCTTCGCATCTCAGGGACGAAAGCCGCATTTTACAACTGCAGCTTCTATGGGGATCAAGACACGCTCTACGACCACAAAGGACTTCACTACTTCAATAATTGCTTCATTCTATCCCTTTACGAGAACTGCAATCTGAATTCAATAGCGAAGAAGGCGGTCTCAATCACGGCTCAGAAGCGCACAAATGCGTCGTTAGAGAGCGGGTTTTCGTTTAAGAACTGCTCCATAACGGGAAGTGGGCAAGTATATCTGGGAAGAGCGTGGGGCGATTATTCGAGGGTTGTTTTCTGTTACACTTACATGGACAAGATTGTTGTGCCCCAAGGCTGGAGTGACTGGGGTGATCAAAAGCGCGCCTTGAGAGCCTATTATGGAGAATACAAGTGCAGTGGGCCTGGGGCGAACTTGACAGGAAGAGTGGCATGGGCACACATACTCACCGACCAACAGGCTCTACCTTTTCTTGGAACCCATTTCATTGACGGTGACACTTGGCTCCTTCCCCTCCCCTCTTGA 1383 0.4845 MTSTIQSLKLQQISERQLLYSRSSDNCFGRSTECRGKVALVGVEKRKLILLXKRSTDIMEIFMEEVEINGYGSWNWLGEKTCGTSGPFERQRWWHTALRWRGSDAWHDRVSIGLKEMRIAKRCNFVWGPMRTDYENWISWNLHNYHKATQWNAKAPDDVLKLRMAETNRVNITARQDSTGDFSTITQALDSIPPRNTRRVIISIGPGVYREKIVIPRNKHFITLLGDAKNPPTITGNDTASIIGRDGMPLGTFRSATVAVDANYFIAVNIRFENTAWHEVGKAGGQAVALRISGTKAAFYNCSFYGDQDTLYDHKGLHYFNNCFILSLYENCNLNSIAKKAVSITAQKRTNASLESGFSFKNCSITGSGQVYLGRAWGDYSRVVFCYTYMDKIVVPQGWSDWGDQKRALRAYYGEYKCSGPGANLTGRVAWAHILTDQQALPFLGTHFIDGDTWLLPLPS 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0343 460 FunFam Pectinesterase 166 459 - -
Acco06g0343 460 Pfam Pectinesterase 172 452 IPR000070 GO:0030599|GO:0042545
Acco06g0343 460 Gene3D - 166 458 IPR012334 -
Acco06g0343 460 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 165 455 - -
Acco06g0343 460 SUPERFAMILY Pectin lyase-like 169 456 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0343 Acco-ChrAcco06 2129918 2139488 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0343 172 457 Carbohydrate Esterase AT5G47500 44.000 9.53e-79 247
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g0343 06 2129918 2139488 Acco06g0343 06 2129918 2139488 ECH