Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0324 ATGCATACATACACTAGTCAAACCAAGCCAGGAGGCTCAGGCGCTTTATCCTTAGCACTTCCCCTGCTTAACCTGCGCAAATTTCGCCGGTTTTGGAGCCGCGATCTTCATCTACACCTTCGCCCAGTTAGTTTCCAGCTCTCTGATCTCTCAACTCCGGTATATTGCCATTTGATTTTAGACCGGATCATGAGTTGTTTCAGCTGTTGCGAAGAGGATGAACACCTCAAAGCTGCTGAGAGTGGCGGACCATACGTGGTAAAAAGCTCAACAGGAAATGATGGAAATTATCATGCTTCCGAAGCTGCAAAGCAGGGTGCTCAGACTGTTAAAGTCCAGCCCATTGAAGTTCCTGCCATATCAGCAGATGAATTAAAAGAAGTTACAGAAAATTTTGGGACAAATTGTCTGATTGGGGAGGGGTCATATGGAAGAGTATATTATGGCGTTCTTAAAAATGGTCTGGCTGCAGCAATAAAGAAGTTAGATGCTAGTAAACAACCTGATGATGAATTTTTAGCCCAGGTTTCCATGGTGTCAAGGCTGAAGCATGAAAATTTTGTTCAATTACTTGGCTATTGTGTTGATGGAAGTTCCCGTGTTCTTGCTTATGAGTTTGCATCTAATGGATCTCTTCACGATATTTTACATGGTAGAAAAGGTGTTAAAGGCGCCCAACCTGGTCCTGTCCTGTCATGGGCACAGAGAGTAAAGATTGCTGTAGGAGCTGCAAAAGGGCTTGAGTACTTGCATGAGAAGGCCAATCCCCACATTATCCACCGAGACATCAAATCAAGCAATGTACTAATTTTTGATGATGATGTTGCTAAGATTGCAGATTTTGATTTGTCAAATCAGGCTCCTGATATGGCTGCACGTCTTCATTCCACTCGTGTCCTTGGAACCTTTGGTTATCATGCACCAGAATATGCAATGACCGGACAACTGAATGCTAAGAGTGACGTGTACAGTTTTGGCGTTGTCCTTCTGGAACTTTTGACTGGAAGGAAGCCTGTTGATCATACACTACCTCGTGGACAGCAGAGTCTGGTTACTTGGGCTACACCAAAACTCAGTGAAGATAAAGTTAGGCAGTGTGTTGATACAAGACTAGGAGGAGATTATCCACCCAAAGCTGTTGCTAAGATGGCTGCTGTTGCTGCGCTATGCGTGCAATATGAGGCTGACTTCAGACCAAACATGAGCATTGTAGTCAAAGCTCTTCAACCTTTGTTGAATGCACGCCCTGGCCCTGCTGGTGAAACTGCAAATTGA 1275 0.4439 MHTYTSQTKPGGSGALSLALPLLNLRKFRRFWSRDLHLHLRPVSFQLSDLSTPVYCHLILDRIMSCFSCCEEDEHLKAAESGGPYVVKSSTGNDGNYHASEAAKQGAQTVKVQPIEVPAISADELKEVTENFGTNCLIGEGSYGRVYYGVLKNGLAAAIKKLDASKQPDDEFLAQVSMVSRLKHENFVQLLGYCVDGSSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWAQRVKIAVGAAKGLEYLHEKANPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDTRLGGDYPPKAVAKMAAVAALCVQYEADFRPNMSIVVKALQPLLNARPGPAGETAN 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0324 424 ProSiteProfiles Protein kinase domain profile. 132 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0324 424 Gene3D Transferase(Phosphotransferase) domain 1 207 416 - -
Acco06g0324 424 ProSitePatterns Protein kinases ATP-binding region signature. 138 161 IPR017441 GO:0005524
Acco06g0324 424 FunFam PTI1-like tyrosine-protein kinase 3 96 206 - -
Acco06g0324 424 Pfam Protein tyrosine and serine/threonine kinase 137 408 IPR001245 GO:0004672|GO:0006468
Acco06g0324 424 Gene3D Phosphorylase Kinase; domain 1 93 206 - -
Acco06g0324 424 FunFam pto-interacting protein 1 208 419 - -
Acco06g0324 424 ProSitePatterns Serine/Threonine protein kinases active-site signature. 258 270 IPR008271 GO:0004672|GO:0006468
Acco06g0324 424 SMART serkin_6 132 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0324 424 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 67 416 - -
Acco06g0324 424 CDD STKc_IRAK 138 411 - -
Acco06g0324 424 SUPERFAMILY Protein kinase-like (PK-like) 111 408 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0324 Acco-ChrAcco06 2031668 2035531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0324 120 409 Receptor kinase-like Gene Family AT4G02010 51.020 6.30e-91 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Acco06g0324 PK_Tyr_Ser-Thr 8.6e-46 CL0016