Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0323 ATGAGTGTGATGCCGCTGCTTATCATGTTCTGCGTCCATTCTAAAGTTCGGAAAATGCAAAATTTTGCCAATGCCCAGTTCAAAGTTAAGCCTATTCTTCATATAATTTTATTATTATTATGTTCGTGGAGAGGTGGAAGCTCTGGAGCAGGAACTTTTGCCTCATTTGCTTGTCATCCTCGTGGTAGAAAAAGCAGGAGATGTAAATCTTTTGAAGTTGATAGGCTGTGTACATATAGACCTCAAATGTCCCCCAGTGAGGATGAATCAATTTTTCAAACGATTTATGGAAATTTGAAACTCTTTGAGCAAGGGAAAATAATTGTATCTGCAGTTTCTCTCATCCTTGTGGTGGGGGTGGTGATCGGCGCCGTTGTGGTGTCTAACAACAAGAACAAAGACCCTCAGATCACTCAGCGTCAGAATGCGGTGAAGGCAATGTGCCAGAACACGGACGACCAAAAGCTTTGCCACGACACTCTGGGCAACGTGCTGAACAGCTCAGACCCAAAAGCATTCTTAGCCGCCGCCGTGGAGGCCTCCGCCAACAACGTCATCAAGGCCCTGAACATGAGCAATAAGCTCAGCGTCGAACACGCTGGCAACAGCACCCAAGGCATGGTCAAGATGGCCCTCGATGACTGCAAGGACTTTCTCGAATCCGCCATGGACAGCCTCCAGGCTTCCATTGACTTCCTAGGTAACAACACCGTCCAAAGCCTGATCGATCGATCCCCTGACTTCAAGAATTGGCTCGCCTCCGTCGTCTCCTACCAACAGGCTTGCATGGATGGGTACGATGACAAGGTGGACGGTGCCACACAGATCAGGACTCAGCTTCAGGAGAATGGTTTGGACGACATGGGGAAACTCACAGGCATAGCCCTTGATATTATGGCTGATTTGGAAAGCATCCTGAGTCAGTTTGGTCTGACGATTAAAATGAACCCTTCTTCTCGTCGTCTTCTTGAAGTGGACAGCGAAGGATATCCCACTTGGTTCTCGGCCTCTGACCGCAAGCTCATGGCCACCATGCGGAGGAGGGGAAGGGGACATCATATCAGGCCTAACGCTGTGGTGGCCCAAGATGGCAGTGGCCAGTTCAAGACCATCATGGATGCCATTAACTCTTATCCTAAGGGTTTCCGAGGAAGATATGCCATCTTCGTTAAGGCTGGTACATACCGAGAATACGTCGTCATTCCCAAGACAGCCGTAAATATCCTCATGTACGGTCAGGGCACTGATAAAACCATCGTCACCGGTAGCAGAAACAATGTTGATGGTTACACCACATCCGACACTGCTACCTTCGTGAATTTGGCAAATGGGTTCATCGCCAAGTACATGACATTTGTGAACACCGCTGGTCCTGAAAAGCACCAAGCAGTGGCATTCAGGAACCAGGGAGATATGTCGGCCTGTTTCGATTGTTCTTTTGTGGGATACCAAGACACGTTGTACGCTCAAACCAACCGTCAACTCTACAGGAACTGCGACATCTCCGGCACCGTTGACTTCATATTCGGAGTGTCCAGCACGTTGATCCAGAGCAGTCGAATCATCGTGAGGAAGCCCATGGACAACCAGTTCAACACAGTGACGGCAGACGGCAGAACCCAGAAGAACCTGCCCACAGGAACAGTGATCCAGAACTGCGACATAGTTCCAGAGGCTGCTCTGTTCCCCGTGAGGTTCAAGATAAGATCGTACCTGGGAAGGCCATGGAAGCAGTACGCAAGAACGGTGGTGATGGAATCAAGAATAGGTGACTTTATTCAGCCAGAAGGCTGGACTCCATGGGCAGGAAATGCCTATCTCAACACATTGTACTATGCAGAGTACAACAACGAAGGACCTGGTGCTAATGTGGCCAGGAGGGTTAGGTGGCCTGGTTACAAGGGCCTCATCAGTAGGAATGAAGCCGCTGGGTTCACCGCCGGCATATTCCTCAAGGGCGGGCCCACTTCCCGATCTGAAGACTGGATGAAGCCCCTTCACGTTCCTTTTGACATCGGCTTCACCAAGGCCTAA 2034 0.498 MSVMPLLIMFCVHSKVRKMQNFANAQFKVKPILHIILLLLCSWRGGSSGAGTFASFACHPRGRKSRRCKSFEVDRLCTYRPQMSPSEDESIFQTIYGNLKLFEQGKIIVSAVSLILVVGVVIGAVVVSNNKNKDPQITQRQNAVKAMCQNTDDQKLCHDTLGNVLNSSDPKAFLAAAVEASANNVIKALNMSNKLSVEHAGNSTQGMVKMALDDCKDFLESAMDSLQASIDFLGNNTVQSLIDRSPDFKNWLASVVSYQQACMDGYDDKVDGATQIRTQLQENGLDDMGKLTGIALDIMADLESILSQFGLTIKMNPSSRRLLEVDSEGYPTWFSASDRKLMATMRRRGRGHHIRPNAVVAQDGSGQFKTIMDAINSYPKGFRGRYAIFVKAGTYREYVVIPKTAVNILMYGQGTDKTIVTGSRNNVDGYTTSDTATFVNLANGFIAKYMTFVNTAGPEKHQAVAFRNQGDMSACFDCSFVGYQDTLYAQTNRQLYRNCDISGTVDFIFGVSSTLIQSSRIIVRKPMDNQFNTVTADGRTQKNLPTGTVIQNCDIVPEAALFPVRFKIRSYLGRPWKQYARTVVMESRIGDFIQPEGWTPWAGNAYLNTLYYAEYNNEGPGANVARRVRWPGYKGLISRNEAAGFTAGIFLKGGPTSRSEDWMKPLHVPFDIGFTKA 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0323 677 PANTHER PECTINESTERASE 116 664 - -
Acco06g0323 677 SMART PMEI_2 139 298 IPR006501 GO:0004857
Acco06g0323 677 Gene3D - 351 674 IPR012334 -
Acco06g0323 677 Pfam Plant invertase/pectin methylesterase inhibitor 143 298 IPR006501 GO:0004857
Acco06g0323 677 FunFam Pectinesterase 351 674 - -
Acco06g0323 677 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 141 299 IPR035513 -
Acco06g0323 677 NCBIfam pectinesterase inhibitor domain 118 270 IPR006501 GO:0004857
Acco06g0323 677 Gene3D Invertase/pectin methylesterase inhibitor family protein 138 303 IPR035513 -
Acco06g0323 677 SUPERFAMILY Pectin lyase-like 354 671 IPR011050 -
Acco06g0323 677 CDD PMEI-like_3 146 300 - -
Acco06g0323 677 ProSitePatterns Pectinesterase signature 2. 501 510 IPR033131 -
Acco06g0323 677 Pfam Pectinesterase 357 653 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0323 Acco-ChrAcco06 2026905 2031289 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0323 105 674 Carbohydrate Esterase AT2G47030 41.089 2.38e-134 405