Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0322 ATGGGTGGAAAAGTTCTCATCTCCGCAGTTTCCCTCATCCTCGTGGTGGGGGTAGCCATCGGCACTGTGATAGTGGTTCATCACAAGCAGAACAATAATGGCGATTCCTCCGGTCAAATCTCTTCCCATCAGAATACGGTGGTGGCACAGATGTGTCAGAACACCGATGACCCAAAGTTCTGCCAACAAACACTGAGCCACGTCAATAACTCTGACCCAAAGGCATTCCTATCAGCCGTAGTGGAAGCAACCACCAACAGCGTCATCAAGGGCTTGAACATGAGCAACAGGCTCATTGTGGATCACAGCAACGGCGAGAAAGGCGTCAAGATGGCCCTTGGTGACTGCAAGGACTTACTCCAATTCGCCATGGACAGTCTTCAAATGTCCACTAACTTGTTGCGCAACGACATCAAAACCGTGACCAACCAAACCCCTGACTTCAGGAACTGGCTGGCCGCCGTCATCTCCTACCAACAGGCCTGCATGGACGGCTTTGACAACAACAACGACGGCGAGAAACAGGTCAAGTCACAGTTGCAAGAGCAAGCATTAGACGGCATCGGCAAGATCACCGGTATCGCTCTCGACATTGTGTCTAATCTCTCCAATCTCCTTGGAAAGTTTGGGCTGCAGTTGGATTTGAAACCTGCTTCCCGCCGACTTATGGAGGTGGACAGCGAAGGTTATCCGACGTGGTTCTCGGCATCTGACCGCAAGCTGTTGCAGAAGATGAAGAGGGGACATCATTTGAAAGCCAATGTGGTGGTGGCTAAGGATGGCAGTGGAAACTTCAAGACTGTCGCAGAGGCCATTGCCTCCTATCCCAAAAATGGTCTCGGCCCCAACGGTAGATACGTCATCTTCGTCAAGGCTGGCGTGTACCAGGAGTACATCATCGTTCCCAAAAATGCAGTGAACATCCTTATGTACGGTGAGGGCTCCAGTAAAACCATCATCACTGGAAACAAAAACTTTGTTGATGGGGTCAAGACCATGCAAACAGCTACCTTTGCCAACACTGCTACCGGGTTCATCGCCAAGAAAATAGCATTTGTGAACAGCGCGGGAGCTGAAAAGCACCAAGCAGTGGCCCTGAGGAACCAGGGAGACATGTCGGCTTTCTTCAATTGCGCCATCCTGGGTAACCAAGATACCTTGTACGCTCAGACCAACCGTCAGTTCTACAAGAACTGCGACATCTCTGGTACGATTGACTTCATCTTTGGTGTGTCACCCACATTGATCCAGAGCTCTAGAATCATCTTGAGGAAGCCATTGGACAACCAATTCAACACAGTGACAGCAGACGGCACACCCCAGAAGAACATGCCCACCGGAATTGTGATCCAAAACTGCGATATCGTGCCCGAGCCAGCTCTGTTCCCCGTCAGGTTCCAATTGAAGTCATACTTGGGAAGGCCATGGAAGGCTTACTCAAAGACTGTGATCATGGAATCCAGAATCGGTGATGTTATTCATCCCGATGGATGGATTCCTTGGGAAGGAAACATGTACCTCGACACCTTGTACTATGCTGAGTACAACAACGAAGGACCCGGTGCTAATTTGCAGGCTAGGATCAAGTGGCCTGGTTACAAGGGCATGATCAGCAAGGCCGAAGCTCAGCAGTTCACCGCCGGCCAATTCCTCCGAGGTGGACCCGAATCCAACTCTGCCGTTTGGCTCAAGGCTCTCCACGTTCCTTATGACATTGGTTTCACCAAGGCTTGA 1734 0.5075 MGGKVLISAVSLILVVGVAIGTVIVVHHKQNNNGDSSGQISSHQNTVVAQMCQNTDDPKFCQQTLSHVNNSDPKAFLSAVVEATTNSVIKGLNMSNRLIVDHSNGEKGVKMALGDCKDLLQFAMDSLQMSTNLLRNDIKTVTNQTPDFRNWLAAVISYQQACMDGFDNNNDGEKQVKSQLQEQALDGIGKITGIALDIVSNLSNLLGKFGLQLDLKPASRRLMEVDSEGYPTWFSASDRKLLQKMKRGHHLKANVVVAKDGSGNFKTVAEAIASYPKNGLGPNGRYVIFVKAGVYQEYIIVPKNAVNILMYGEGSSKTIITGNKNFVDGVKTMQTATFANTATGFIAKKIAFVNSAGAEKHQAVALRNQGDMSAFFNCAILGNQDTLYAQTNRQFYKNCDISGTIDFIFGVSPTLIQSSRIILRKPLDNQFNTVTADGTPQKNMPTGIVIQNCDIVPEPALFPVRFQLKSYLGRPWKAYSKTVIMESRIGDVIHPDGWIPWEGNMYLDTLYYAEYNNEGPGANLQARIKWPGYKGMISKAEAQQFTAGQFLRGGPESNSAVWLKALHVPYDIGFTKA 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0322 577 NCBIfam pectinesterase inhibitor domain 41 202 IPR006501 GO:0004857
Acco06g0322 577 SUPERFAMILY Pectin lyase-like 251 555 IPR011050 -
Acco06g0322 577 ProSitePatterns Pectinesterase signature 1. 282 301 IPR018040 -
Acco06g0322 577 Gene3D - 248 574 IPR012334 -
Acco06g0322 577 SMART PMEI_2 43 198 IPR006501 GO:0004857
Acco06g0322 577 CDD PMEI-like_3 51 204 - -
Acco06g0322 577 Pfam Plant invertase/pectin methylesterase inhibitor 47 198 IPR006501 GO:0004857
Acco06g0322 577 ProSitePatterns Pectinesterase signature 2. 401 410 IPR033131 -
Acco06g0322 577 FunFam Pectinesterase 248 574 - -
Acco06g0322 577 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 47 203 IPR035513 -
Acco06g0322 577 Pfam Pectinesterase 254 553 IPR000070 GO:0030599|GO:0042545
Acco06g0322 577 Gene3D Invertase/pectin methylesterase inhibitor family protein 44 204 IPR035513 -
Acco06g0322 577 PANTHER PECTINESTERASE 18 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0322 Acco-ChrAcco06 2013979 2015961 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0322 6 570 Carbohydrate Esterase AT5G49180 38.889 3.56e-128 385