Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0321 ATGATGAACAAGAAAGTGGTTGTGTCCGCTGTTTCTGTCATCCTCGTGGTGGGTGTGGCCCTGGGCGTCGTCGGCGTCCTCCACTACAGGAACAAGGGCAGCAGCAACAATGTGCAGCAAGAGACAAACACCCAGAACAAGGCCGTTGCCTCCCTGTGCCAAAACTCCGACGACCCCCAGCTCTGCCACGACACGCTCGACTCCGTAAACAGCACCGATCCTAAGGATTATATAAAGGCAGTGGTGGAGTCCGCCATGAAGACCGTTATATCGTCATTTAACTTGACGGACAGGATTGAAGTAGAGCACAGGAACGGGTCCACAAGAGGCATAAAGATGGCCGTCGAGGATTGCAAGGACTTGCTGCAATCTGCGATCGCGGAACTGCAGGCATCGGGTGTGCTGGTTCAAGAAAACAATGCCCGGAGCGTAACCGACCGGGAAGATGACCTCAAGAACTGGCTGAGCGCCGTCATCGCGTACCAGCAATCCTGTTTGGATGGGTTTGAGGCGGAGAACGAGGGCGAGAAAGCGGTTCAGCAGCAATTGCAAACGGGCGGTCTGGACAACGTGGAGAAGCTCACAGCGTTGGCGCTAGACGTTGTGTCCGGCGTTTCCCAGCTTCTCTCTGTCTTTGACTTGGACTTCGACGTCAAGCCTGCTTCCCGTCGCCTTCTGAATAACGTGGATTCTGAGGGCTATCCCACTTGGCTCTCGGGCCGCGACCGCAAGCTCATTGAGCAGCAGAACACTGGACATCCCACCGTTGGGCCAAACGCCGTGGTTGCCCAGGACGGAAGTGGCCAGTTCAAGACCATTCAAGAAGCCGTCAACTCGTACCCCAAGAAATTCGAAGGCAGATTCACCATCTACGTCAAGGCCGGTATCTACAATGAATACGTCCACATCACCAAGAAGCAGCCCAACATCTTCATGTACGGCGATGGCCCCAACAAGACCATTGTCACCGGCAACAGGAGCTACACCTCCGGCTGGAAAACAATCCAAACCGCCACCTTCACTACCTTGGCTGATGGCTTCATTGCCAAGTCGATGGCCGTCGAGAACACCGCCGGGCCTGAAGGACACCAAGCAGTTGCACTGAGGGTGATGGGCGATCGCTCCGCTTTCTTCGACTGTGCCATCCGCGGCTACCAAGACACCCTGTACGCACACGCCAAACGTCAATTCTACCGCAACTGTGAGATCTCCGGCACAGTGGACTTCATCTTCGGATACGGAAGCACCTTGGTCCAGAACTCTAGGATCTTGATCAGGAAGCCCATGGACAACCAGCAAAACATCGTCGTCGCCGACGGCACTGCCAACAGGCAAATGCGCACTGGAATTGTCCTCCAGAACTGCCAGATCATGGCCGATGCCAGCCTCAACGCCGACAGGCTGATCATCAAGTCCTACCTGGCCAGGCCATGGAAGGCATTCTCCAGAGCCATCTTCATGGAAAATGAAATCGGCGATCTCATCCAGGCCGATGGTTATCTTCCATGGATGGGCAGCATGTACCTTGACACCTGCTACTTCGCCGAGTATGCAAACGCCGGTCCCGGTGCTGCCACAAACAAAAGGGTCAAGTGGGGCCACGGCGTCCTCACCAAGGATGAGGCCACTCAATACACCGCCGAATCTTGGCTCCAGGCCAGCACATGGCTCCCCGCCACCGGCATTGCCTTCGACAGCGCTTTCACCAAAGCTTAA 1716 0.5571 MMNKKVVVSAVSVILVVGVALGVVGVLHYRNKGSSNNVQQETNTQNKAVASLCQNSDDPQLCHDTLDSVNSTDPKDYIKAVVESAMKTVISSFNLTDRIEVEHRNGSTRGIKMAVEDCKDLLQSAIAELQASGVLVQENNARSVTDREDDLKNWLSAVIAYQQSCLDGFEAENEGEKAVQQQLQTGGLDNVEKLTALALDVVSGVSQLLSVFDLDFDVKPASRRLLNNVDSEGYPTWLSGRDRKLIEQQNTGHPTVGPNAVVAQDGSGQFKTIQEAVNSYPKKFEGRFTIYVKAGIYNEYVHITKKQPNIFMYGDGPNKTIVTGNRSYTSGWKTIQTATFTTLADGFIAKSMAVENTAGPEGHQAVALRVMGDRSAFFDCAIRGYQDTLYAHAKRQFYRNCEISGTVDFIFGYGSTLVQNSRILIRKPMDNQQNIVVADGTANRQMRTGIVLQNCQIMADASLNADRLIIKSYLARPWKAFSRAIFMENEIGDLIQADGYLPWMGSMYLDTCYFAEYANAGPGAATNKRVKWGHGVLTKDEATQYTAESWLQASTWLPATGIAFDSAFTKA 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0321 571 FunFam Pectinesterase 253 568 - -
Acco06g0321 571 Gene3D Invertase/pectin methylesterase inhibitor family protein 43 205 IPR035513 -
Acco06g0321 571 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 46 202 IPR035513 -
Acco06g0321 571 CDD PMEI-like_3 51 206 - -
Acco06g0321 571 ProSitePatterns Pectinesterase signature 2. 403 412 IPR033131 -
Acco06g0321 571 Pfam Plant invertase/pectin methylesterase inhibitor 48 200 IPR006501 GO:0004857
Acco06g0321 571 PANTHER PECTINESTERASE 16 558 - -
Acco06g0321 571 FunFam Pectinesterase 45 206 - -
Acco06g0321 571 NCBIfam pectinesterase inhibitor domain 38 200 IPR006501 GO:0004857
Acco06g0321 571 SUPERFAMILY Pectin lyase-like 255 564 IPR011050 -
Acco06g0321 571 SMART PMEI_2 44 201 IPR006501 GO:0004857
Acco06g0321 571 Gene3D - 254 568 IPR012334 -
Acco06g0321 571 Pfam Pectinesterase 259 553 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0321 Acco-ChrAcco06 2008545 2010347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0321 5 557 Carbohydrate Esterase AT3G62170 41.308 1.77e-139 415