Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0313 ATGGATCACAGTCCTCATCGTCCCTCTCGTGAATTGACCTTCTTCAGCTCCGGCGACTTTCTCCCCCTTACTTCAGATCCAATAGCCGGCCGCCACCAACCTCCCCTCAAGGAAATGGATTTCTTCTCCCGCTCAGTTGACAAAAACTGTGATTCTAGCCCTCCTCATCATCAGGATCCAGATCATGACACCGACCGCCGCGACGGAAATGGATCGGTTCCTCCCACTGATCGGCCTGTAAACACCGGCCTAAATCTAACGCGAGTAAGTTCTGGAACGTCAGTAGAGGCTGATGAGAATCCCAACAACGAGCTGAGCGCAATCCAAGGTGAATTACGGAGGCTGCATGCAGAGAACAGGAAGTTGAGAACTATGCTCGACCAGATCACCAAGAGCTATAGCCAACTACAAGCTCAGCAGTTCATCGCTCTGCAAAAACAAAACCCTTTGAAGGTTGAAGCAAATGGCATAGGGTCGGGAAAACAGTTGAGGGACCCACAGCCATCTACCAATAATGCATCGATCTCCGATGATAAGACTCAATCAGTTTCGGCGCCCTCAAACAATGCAGAGGTAATGTCAAACCGACGCGATCATTTGACTAAGCTTCTTGGGAAGCGAGCTTGTCCTGAAGATGGTTTTGACCGCTCCTCTCAAAGTTGGGAGTCATGCATGAGCACCAGGTTACAAGAATCCAAGAGATCAGACGAACAAGTTTCGGGTCAGGCCCCCTTCAGGAAAGCCAGGGTTTCCGTACGCGCAAGATCAGAAGCTCCTTTGATAAGCGATGGATGTCAATGGAGAAAATATGGTCAGAAAATGGCAAAGGGCAATCCTTGCCCTCGTGCTTATTATCGTTGCACTATGACCCTAGGATGCCCAGTTCGCAAGCAGGTGCAAAGGTGTGCGGAGGACAAGACAGTGCTGATAACTACCTACGAAGGAAATCACAACCACCCTCTCCCTCCTGCGGCCACCGCCATGGCGAATACAACATCGGCGGCGGCCGCAATGCTCCTTTCCGGTTCATCATCAAGTACGAGAAAGGAAGGCTTAACACATTGCGCGGGATACATGGGTTCGATGGCCTACCCGTACGCATCAATGGCCACATTATCAGCGTCTGCGCCATTTCCAACTATCACCTTGGACTTGACCCAAGTCCCAAACGGCATGCAGCAGCAACGAGCACATCCCTCATCATCAATGCCAGTAATGTTTCATGGGATTCCTCAGGTACAGCTAACAGGACATCCCATGACGTTCCCACAGAACTTGCTTCAACTAGGGCAAAGGCTGCCTTCCAATTCGTCGGCTATGGTTGAGACGGTGAGTGCAGCCATTGCTTCTGATCCCAATTTGACTGCAGCATTGGCGGCTGCAATCTCATCCATCATAGGGGCATCGGGCGGCGGCGGCGGCGGAGCAGCAGGTAATAATACGGTTGCGGCACCTACCGGCGCTGCTATAAATATTCCAAATAATGCCTTTAAACCCAATCTTCCTGTGCTTCCTCTCTCCCCGCAACTTCCTCGTTCTTGCACTACGCTCTCCACCAACTAG 1563 0.5131 MDHSPHRPSRELTFFSSGDFLPLTSDPIAGRHQPPLKEMDFFSRSVDKNCDSSPPHHQDPDHDTDRRDGNGSVPPTDRPVNTGLNLTRVSSGTSVEADENPNNELSAIQGELRRLHAENRKLRTMLDQITKSYSQLQAQQFIALQKQNPLKVEANGIGSGKQLRDPQPSTNNASISDDKTQSVSAPSNNAEVMSNRRDHLTKLLGKRACPEDGFDRSSQSWESCMSTRLQESKRSDEQVSGQAPFRKARVSVRARSEAPLISDGCQWRKYGQKMAKGNPCPRAYYRCTMTLGCPVRKQVQRCAEDKTVLITTYEGNHNHPLPPAATAMANTTSAAAAMLLSGSSSSTRKEGLTHCAGYMGSMAYPYASMATLSASAPFPTITLDLTQVPNGMQQQRAHPSSSMPVMFHGIPQVQLTGHPMTFPQNLLQLGQRLPSNSSAMVETVSAAIASDPNLTAALAAAISSIIGASGGGGGGAAGNNTVAAPTGAAINIPNNAFKPNLPVLPLSPQLPRSCTTLSTN 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0313 520 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 94 474 IPR044810 GO:0003700
Acco06g0313 520 Pfam WRKY DNA -binding domain 263 320 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco06g0313 520 MobiDBLite consensus disorder prediction 1 84 - -
Acco06g0313 520 SMART WRKY_cls 261 321 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco06g0313 520 MobiDBLite consensus disorder prediction 37 72 - -
Acco06g0313 520 FunFam probable WRKY transcription factor 31 246 323 - -
Acco06g0313 520 Gene3D WRKY domain 246 323 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco06g0313 520 MobiDBLite consensus disorder prediction 155 191 - -
Acco06g0313 520 Coils Coil 105 139 - -
Acco06g0313 520 MobiDBLite consensus disorder prediction 162 191 - -
Acco06g0313 520 SUPERFAMILY WRKY DNA-binding domain 254 322 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco06g0313 520 ProSiteProfiles WRKY domain profile. 256 322 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0313 Acco-ChrAcco06 1967646 1970093 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0313 10 520 WRKY Transcription Factor Family AT4G01720 42.115 4.42e-84 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco06g0313 WRKY 3.7e-24 CL0274