Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0304 ATGGTGGGTACGTTGCGTCACTCCAATCAGTCGACGCAATCATTTTGGCTCTACAAAGAACCGATCATCACTGATGCTAACAGCTGTTCACAGCATGAGGGAAGCCTCTCTTCCCACTTTCCTAGCTCACTGAACCGCCAATTCTCCTTGTTTCGACGTTGGGATATTATCTTCTTTTTATTATCTTGGAGCCTCCATCTTTACTATTCTGTGGGAATAAATCGAGAGCTGCAAAGTTCTTTAGAGAAGACTAAGCCACAGAGTATAGTAGGAAACATGGCAATGAAGCTGATTCTAATAGTCGTTGGGTTTGCTTGCTGCATTTCTGGGGTTATCTCCGGTGGATCTGAGATACACTCTGCATTTTCTCACTTAGAGAATGATTTCGTGGCAGCAAAAGCTTCGTCCTCCACGCCTCAACCTCTCATGGTCGCCCTCACTCTCATTCAAGGAGCTGCTTCTAAGGGAGCTGTCTGTTTGGATGGAACACTGCCTGGTTACCACTTGCATCGTGGATTCGGATCTGGGGCTAACAGTTGGGTCATTCAACTGGAGGGTGGAGGATGGTGTAATACCATTAAGAGTTGTGTTTTTAGAAAAACAACTCGTCGTGGTTCCTCAGATCGCATGGAAAAGCAAATACCATTCACGGGAATTTTGAGCAACAAAGCTGAAGAAAACCCTGATTTCTTCAACTGGAACAGAGTCAAAGTACGGTACTGTGATGGAGCATCGTTCAGTGGGGATGGTGAGGACACGGGTGCAAAACTTCAATTCAGAGGACAAAAAATATGGCTGGCTGCTATGAAGGAGTTAATGTCCAAGGGAATGCAGAATGCTGACCAGGCCCTTCTCTCTGGATGCTCTGCGGGTGGCTTGGCATCCATTATACATTGTGATGAATTCCGGGGCTTGTTTCCTAAATCTACCAAAGTGAAATGTTTGAGTGATGCAGGGCTTTTTCTTGATGCAATTGATGTATCTGGGGGACGCACAATGAGGAATCTATTTGGAGGTGTTGTTAAATTACAGGGAGTACAGAAAAATCTGCCAGAAAGTTGTCTCAGCAAACTGGATCCAACTTCGTGCTTCTTTCCTCAGAATTTGATCAGCCATGTTGCGACCCCTTTGTTTATACTCAATGCAGCCTATGATGCATGGCAGCTCCAAGCCAGTTTAGCACCGCCTTCAGCTGACCCCCATGGCGCTTGGAATAGCTGCAAATCAAACCATGCAAATTGTAATTCATCTCAGATTCAGTTCCTGCAAGACTTCAGAAATAAAATGCTTAATGCTTTGGATGGTTTCTCACTGTCATCTAAAACTGGATTATACATAAATTCTTGTTTTGCTCATTGCCAATCTGAGAGACAGGATACTTGGTTTGCTGATGACTCTCCCCTGATTAAGAACAAGCCAATTGCAATAGCTGTTGGAGATTGGTATTTTGATCGACAAGTAGTTAAAGCTATTGACTGTGCATACCCCTGTGACAAGACCTGCCATAATCTGGTCTTCAAGTGA 1524 0.4436 MVGTLRHSNQSTQSFWLYKEPIITDANSCSQHEGSLSSHFPSSLNRQFSLFRRWDIIFFLLSWSLHLYYSVGINRELQSSLEKTKPQSIVGNMAMKLILIVVGFACCISGVISGGSEIHSAFSHLENDFVAAKASSSTPQPLMVALTLIQGAASKGAVCLDGTLPGYHLHRGFGSGANSWVIQLEGGGWCNTIKSCVFRKTTRRGSSDRMEKQIPFTGILSNKAEENPDFFNWNRVKVRYCDGASFSGDGEDTGAKLQFRGQKIWLAAMKELMSKGMQNADQALLSGCSAGGLASIIHCDEFRGLFPKSTKVKCLSDAGLFLDAIDVSGGRTMRNLFGGVVKLQGVQKNLPESCLSKLDPTSCFFPQNLISHVATPLFILNAAYDAWQLQASLAPPSADPHGAWNSCKSNHANCNSSQIQFLQDFRNKMLNALDGFSLSSKTGLYINSCFAHCQSERQDTWFADDSPLIKNKPIAIAVGDWYFDRQVVKAIDCAYPCDKTCHNLVFK 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0304 507 PANTHER NOTUM-RELATED 107 503 IPR004963 GO:0016787
Acco06g0304 507 Pfam Pectinacetylesterase 139 487 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0304 Acco-ChrAcco06 1913677 1918424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0304 143 507 Carbohydrate Esterase AT1G57590 72.877 0.0 595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g0348 02 2562287 2565474 Acco06g0304 06 1913677 1918424 CCT
Acco02g0316 02 2324616 2328926 Acco06g0304 06 1913677 1918424 ECH
Acco06g0304 06 1913677 1918424 Acco02g0316 02 2324616 2328926 ECH
Acco06g0304 06 1913677 1918424 Acco06g0304 06 1913677 1918424 ECH