Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0283 ATGTATTTCCCTGCTTTGCTACCTCATGATTGCCTTCTATTAATCTATTCTGCTGCAAGCCATTCGCTGTCTTCCCGATTGCCTTCTCCCTGCTTTGACCGATGCTCTGCTATTAATTATGTTGAAAATGGTCAGATTTCAACGCAAGGCCAATCCAGCAGAGCAAAACGGAGCCCGACTTCCAAGAGTTTACCACCTCACACTCACAGTGCCAAGATTCGAGACAAAGATGTAGGAAATGCCACCGACATCCAGATGAGAAAGTTCGGGGATTTAGACTCAGGATTGAATGATATTCCGATGTCAGTACCAACTGGTGAAGTTGATTTGAGCCCAGATGACAGCACGACTTCTTGGTTGAATTATACCCTAGATGACTTCTTTCAACATGACTATAATTCTGGGTTTTTTCATGAACCGATTGGGGACACTCTAAATGAGACCCCTCCCTCGGTTAATCATTATCTAAGGGATAAAAAACATAACTGTAATCGGGAATTCAGGGACTGTCATAATAATCCTTGTAGTGCCACCCAGCATTCACATTCCAGGGAAATCACCGAGATTCCATCTCCCTCTGGTGGTTTCTCTAGCTTAAAGATGCATAAGAATGACCCGATAACACCTTGTACTAATTCCGCTTCCACCATAATCAACTTCCCCCACTTTGCAAGACCTGCTGCTATCGTGAAAGCCAATCTTCAGAGCATTAGTACGAAGTCCGGTTTATCTTTAGCAAGATCAGAAAGCATGTTACATGTGAATAAAGGTGCTGCCGCAACTAGAGGCAATCCTCCTGAATCAGCCTTTGTTATTCCCAAGAGTGAACATCCAGGGGAGTCAAATATGCACTGCCAACAGGCGTTGGGTTCCTTCAAGTATGATTTGGAAACGTTGGAATTGAAATCTCTGGAACAGAAAGGCGCCACTTCTGAACAGTTAAATCAAGCCCGCAAAAAAGATACCTTCAAGGACGATCAGACTTCTGATCAAGTTCTTGCTGAGAGTAGCACTAAAGGACATACAACTCATGAAAAAAGCATAGAGCAGGCAGTTGCCTCTTCCTCTGTTTGCTCTGGCAATGGCGCGGAGATGTTTTCAGACAACTCAAATCAAAATTTGAAACGAAAAAATCGAGACACCGAGGGATCTGAGGGTCATAGTGAAGATGTCGAGGAAGAATCAGGCTTTACCAGAAAGGCAGGTCCTGCACGTGGAGGTACAGGTTCCAACAGAAGCCGGGCAGCTGAAGTGCATAATCTATCTGAAAGGAGGCGAAGAGACAAGTTCAATGAGAAAATGCGTGCTTTGCAAGAGCTCATACCCAATTGCAACAAGGTGGACAAAGCTTCAATGTTGGATGAAGCAATTGAGTATCTGAAGACACTGCAGCTCCAAGTTCAAATGATGTCAATGGGAGCTGGTTTATACGTACCTCCAATGATGTTACCCCATGGAATGCAGCACATGCATTCACCCATGTCTACATTTCCACCTATGGGTGGTTGCATGCCATTGGGGTTAGGAATGGGATATGCTACGAGGATGCCTAATATGAGTAGTGGGTGTTCCAGATTTCCAATGATTCAGTTGCCCCAAATGCAAGGAACTTACATTTCGGTTCCCTCTATGTTTGGGGCCACTGCTTTGCATGGGATGGCAAGATCAAATCCTCAGATGTTTGGGTTATGTGGTCAGGGATTTCCTTTGTCAGGAGCGCCTCTCATGAACCCATCAACTTTGGGACTAAATGGCAGTAGGACAGCTGGAATCACAAACGACATGGATTCTGCTTCAGCCTCTGGCTTGAACGGTCCTATACAAGGCACTGGCGGCAGTAACTCAACAAGGGATATTTCTACCCAGGTCATGAACGATGCTCGGCATTGA 1890 0.4508 MYFPALLPHDCLLLIYSAASHSLSSRLPSPCFDRCSAINYVENGQISTQGQSSRAKRSPTSKSLPPHTHSAKIRDKDVGNATDIQMRKFGDLDSGLNDIPMSVPTGEVDLSPDDSTTSWLNYTLDDFFQHDYNSGFFHEPIGDTLNETPPSVNHYLRDKKHNCNREFRDCHNNPCSATQHSHSREITEIPSPSGGFSSLKMHKNDPITPCTNSASTIINFPHFARPAAIVKANLQSISTKSGLSLARSESMLHVNKGAAATRGNPPESAFVIPKSEHPGESNMHCQQALGSFKYDLETLELKSLEQKGATSEQLNQARKKDTFKDDQTSDQVLAESSTKGHTTHEKSIEQAVASSSVCSGNGAEMFSDNSNQNLKRKNRDTEGSEGHSEDVEEESGFTRKAGPARGGTGSNRSRAAEVHNLSERRRRDKFNEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQMMSMGAGLYVPPMMLPHGMQHMHSPMSTFPPMGGCMPLGLGMGYATRMPNMSSGCSRFPMIQLPQMQGTYISVPSMFGATALHGMARSNPQMFGLCGQGFPLSGAPLMNPSTLGLNGSRTAGITNDMDSASASGLNGPIQGTGGSNSTRDISTQVMNDARH 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0283 629 MobiDBLite consensus disorder prediction 46 80 - -
Acco06g0283 629 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 414 463 IPR011598 GO:0046983
Acco06g0283 629 Gene3D - 410 472 IPR036638 GO:0046983
Acco06g0283 629 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 411 474 IPR036638 GO:0046983
Acco06g0283 629 FunFam Basic helix-loop-helix transcription factor 409 472 - -
Acco06g0283 629 CDD bHLH_AtPIF_like 414 476 IPR047265 -
Acco06g0283 629 MobiDBLite consensus disorder prediction 257 283 - -
Acco06g0283 629 MobiDBLite consensus disorder prediction 46 67 - -
Acco06g0283 629 MobiDBLite consensus disorder prediction 347 372 - -
Acco06g0283 629 MobiDBLite consensus disorder prediction 306 429 - -
Acco06g0283 629 SMART finulus 420 469 IPR011598 GO:0046983
Acco06g0283 629 MobiDBLite consensus disorder prediction 592 629 - -
Acco06g0283 629 PANTHER TRANSCRIPTION FACTOR PIF3 42 599 IPR044273 GO:0003700|GO:0006355
Acco06g0283 629 MobiDBLite consensus disorder prediction 373 399 - -
Acco06g0283 629 Pfam Helix-loop-helix DNA-binding domain 418 464 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0283 Acco-ChrAcco06 1784461 1788044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0283 12 594 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09530 35.158 7.95e-66 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco06g0283 HLH 6.4e-13 No_clan