Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0252 ATGGCATCTTTGGAATCAATTGTGGATCCTATAAGTTCAGAGACGTACCAAGAAGGCAGTCAGAGAAAGCGAAGGAAAATCGGGCACGATGCCGGCAACGATCAGGATTCGCTCGCTGCGATTCCGTGGAGATCCGAGACAGAGCAGCGGATCTATTCCTCCAAACTCGTCGACGCTCTCCGCCGCGTTCTTCGCCGGGGTTCTTCTTCCACGGCCAAGCCTCGCCTCGGGCGCGATGTTCGTGAGGTCGCCGACAGGGTTCTCGCCGTGACAGCGAAAGGCAGGACTCGGTGGAGTCGGGCGATATTGGCCTCTCCGCTCAGTCGGAGAAAGTTCCAGAGGCAGCATAAGAAGGTCAAGAGGGCGGCGAACGGATTGAAGAAACCAGAAGTTAGAAGAGAGAGAAGGAGGCTGCCGGCCGTGCAGAGGAAAGCGCGAGTTCTCGGCCGGTTAGTTCCCGGCTGCCGGAAGGTTTCGTTTCCGAGCCTTCTGGAAGAAACCACTGATTATATTTCGGCCTTGGAAATGCAAGTTCGAGCCATGACAGCACTCACAGAGCTGCTCGGGGGTGGCGCGCCGGCCAATCGGCTCGGGCAGCCTCGACCGTGA 609 0.5796 MASLESIVDPISSETYQEGSQRKRRKIGHDAGNDQDSLAAIPWRSETEQRIYSSKLVDALRRVLRRGSSSTAKPRLGRDVREVADRVLAVTAKGRTRWSRAILASPLSRRKFQRQHKKVKRAANGLKKPEVRRERRRLPAVQRKARVLGRLVPGCRKVSFPSLLEETTDYISALEMQVRAMTALTELLGGGAPANRLGQPRP 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0252 202 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 44 188 IPR044660 GO:0006355
Acco06g0252 202 MobiDBLite consensus disorder prediction 1 17 - -
Acco06g0252 202 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 127 192 IPR036638 GO:0046983
Acco06g0252 202 CDD bHLH_AtIBH1_like 132 185 IPR044549 GO:0006355
Acco06g0252 202 MobiDBLite consensus disorder prediction 18 32 - -
Acco06g0252 202 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 125 174 IPR011598 GO:0046983
Acco06g0252 202 Gene3D - 113 190 IPR036638 GO:0046983
Acco06g0252 202 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0252 Acco-ChrAcco06 1629214 1629822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0252 4 181 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 43.979 4.20e-39 131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g0273 02 2028593 2029198 Acco06g0252 06 1629214 1629822 CCT
Acco06g0252 06 1629214 1629822 Acco06g0252 06 1629214 1629822 ECH
Acco02g0273 02 2028593 2029198 Acco06g0252 06 1629214 1629822 ECH