Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0230 ATGTCCCGGAAAGAAGGAGATTACTCACGCATTGAAGCTATAATACGACGAGTGGTACGAGAGGAGCGTCCACCTATACTTCAAGGGCACCGTCATCTGTGTCCTGGCTGCGAAGAAACCCTTCATCAGTCGGAAACATCTGGAAGCAGAGCTTTACGTTTGTGTTTCACAAACAGATTGCCTGCAGAACTATATACACAAACTAGAATAACCTATAAGGATGGTGCTCGGATCAGAATTGTTCTGTATAATTCTCAGAACTGTATAGTGACAGAAGGTCCTCTTTCGTGCAGCAGGATAAAGATGTATGCGCTCAATGGAGAGTTTGGTTCCAACGGTAGCGAAGATTGGAGCGAAGTGGAATTCAACGCCAATATCTCACCTCGAAGAGAGAACAAGGGCGAGTTACTGTATGGAGAAAGGTTAATCACATTAGAAAATGGAGTGGGTTTTGTCCCTGACATTTACTTTAGTGATAACTCGAGCTGGACAAGAAGCCGCAAGTTCAGGTTAGGAGCCAAAGCTGTGGAAAACGAAGCAAGCATAAGAGAAGGGAGGAGTGAAGCTTTCGTCGTCAAGGATAAACAGTACGAGAAACGCGACCGCCCATCACTGAAAGACGAAATATGGCGTTTGAAAAAGATAGCCCAAAACGGTGAAATTCGCAAGCGGCTGTCTCGGTATAAAGTAGAAACTGTTAGAGATCTGTTGCGGCTTTACGTGATGAACCCTCCTTCATTGCTAGAGAATATGGGTAAAGTTGCGATGAAGTCGTGGGAGACAATCATTGAACACGCCAGGTCTTGTGAGATAGACGAAGGTGAGCGTTACGTTTACCAGTACCTCACCGCAGCACATCAACCAATACGTCTTCTCTTCAATATCATCTATGAGCTAGTAGAAGTGAGTTTTGATGCTGGCCATAATTATCGTCCTTCGGAGTTGTTGAACTCGGAAGAGAAGCGTCTGGTGGAGATAGCTAAGCGGAATGCTTACGACAACGTGGAGATGTGGTCAATTTATGAGTCGACGAAAACGTTGGCAGATGCAGGCCAGCCTTCCAGTTCTACATCGCTTGGTGAATTAATACTAGGGGATGAACAAGAAGGCACTGACCAAATGTCAACTCCACAAGTTGGTATCGCACCAAATGGAGGGGCTCCACAACAGGTTGATCAACAAGGGCAATCGTTAGACTGGTGGGTTGATTATCTGCTCGGTGATAGCGAATTGCATTACTCTCCGTCTTCATTTCTAGATGATTTCCAGCGTTGCCTTCATTCTGACGCGCCTCCTTCAACCCCCGCTGGACGCAAATGCAAAACGGTGTGGGTTAAGATCCGGGCTTATTTCAAATGGCTCATCTTACGCAGATCTCTCTGCCGCTAA 1389 0.4608 MSRKEGDYSRIEAIIRRVVREERPPILQGHRHLCPGCEETLHQSETSGSRALRLCFTNRLPAELYTQTRITYKDGARIRIVLYNSQNCIVTEGPLSCSRIKMYALNGEFGSNGSEDWSEVEFNANISPRRENKGELLYGERLITLENGVGFVPDIYFSDNSSWTRSRKFRLGAKAVENEASIREGRSEAFVVKDKQYEKRDRPSLKDEIWRLKKIAQNGEIRKRLSRYKVETVRDLLRLYVMNPPSLLENMGKVAMKSWETIIEHARSCEIDEGERYVYQYLTAAHQPIRLLFNIIYELVEVSFDAGHNYRPSELLNSEEKRLVEIAKRNAYDNVEMWSIYESTKTLADAGQPSSSTSLGELILGDEQEGTDQMSTPQVGIAPNGGAPQQVDQQGQSLDWWVDYLLGDSELHYSPSSFLDDFQRCLHSDAPPSTPAGRKCKTVWVKIRAYFKWLILRRSLCR 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0230 462 PANTHER OS02G0177800 PROTEIN 11 379 IPR012416 GO:0005516
Acco06g0230 462 Pfam Calmodulin binding protein C-terminal domain 277 336 IPR046829 -
Acco06g0230 462 Pfam Calmodulin binding protein central domain 204 269 IPR046830 -
Acco06g0230 462 Pfam Calmodulin binding protein-like N-terminal domain 52 195 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0230 Acco-ChrAcco06 1507795 1510583 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0230 10 335 Calmodulin-binding Proteins AT5G26920 40.896 3.11e-65 214