Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0229 ATGGATCCGGAGGGAAGATCCAACGGCGGATCTAGCTACTACTCGATCCTCGGGATTCCTAGGGACGCTTCCTTCTCTGATGTCCGCACCGCCTATCGGAATCTCGCTCTGAAGTGGCACCCGGACAGATGGGCCGGAAACATTGCAATCATAGGAGAAGCCAAACGGCGATTCCAGCAAATTCAAGAAGCCTACTCAGTTCTTTCCGATCAGTCTAAAAGGTCAATGTACGACGCCGGATTCTACGATCCTTTAGAAGAAGAAGACGAAGAATTCTGTGATTTCATGAACGAAATGATCTCCATGATGAACAATGTGAAGGACGAGGGGAACAGTTTGGAAGATCTACAAAGGATGTTCGTAGAAATGGTTGGTGGAGATGAAATGAGCTTCGAGTCGAAGAATAATCAGACGAGTGGCAAGAGAGGGCGTGTCAGTGCACCAAGGGGCAACGCAGCTAAGCGCAGCAACTCTCGCTTCTAG 483 0.4928 MDPEGRSNGGSSYYSILGIPRDASFSDVRTAYRNLALKWHPDRWAGNIAIIGEAKRRFQQIQEAYSVLSDQSKRSMYDAGFYDPLEEEDEEFCDFMNEMISMMNNVKDEGNSLEDLQRMFVEMVGGDEMSFESKNNQTSGKRGRVSAPRGNAAKRSNSRF 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0229 160 CDD DnaJ 13 70 IPR001623 -
Acco06g0229 160 ProSiteProfiles dnaJ domain profile. 12 81 IPR001623 -
Acco06g0229 160 MobiDBLite consensus disorder prediction 130 160 - -
Acco06g0229 160 MobiDBLite consensus disorder prediction 130 144 - -
Acco06g0229 160 Pfam DnaJ domain 13 78 IPR001623 -
Acco06g0229 160 Gene3D DnaJ domain 3 102 IPR036869 -
Acco06g0229 160 SUPERFAMILY Chaperone J-domain 12 84 IPR036869 -
Acco06g0229 160 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Acco06g0229 160 PANTHER PUTATIVE, EXPRESSED-RELATED 8 139 - -
Acco06g0229 160 SMART dnaj_3 11 73 IPR001623 -
Acco06g0229 160 PRINTS DnaJ domain signature 32 47 IPR001623 -
Acco06g0229 160 PRINTS DnaJ domain signature 14 32 IPR001623 -
Acco06g0229 160 PRINTS DnaJ domain signature 53 73 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0229 Acco-ChrAcco06 1505195 1506501 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0229 13 79 C2H2 Transcription Factor Family AT1G74250 39.706 1.32e-11 59.7