Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0226 ATGGAATCTTCGTCGGATGAATCGAGTGACATCAACAAGTGCTGCACCGATTGCAAAACCACTAAAACTCCACTCTGGAGAGGAGGGCCAGCTGGGCCCAAGACGCTATGTAACGCTTGTGGGATTAGATACAGGAAGAGAAGGGCTTCTCCGGGGAAAAGAGATAGAACTCATAATTCAAGCGGCGGCGCAGTTGATGCCGTCACCGTCGCGGTCATATCCACATCTGCCGCAGCCACCACTGAAAATCAGTGGAGGGAATCGTTGGAAATGAACATGGTAGGATGGGATGAGGAGGTTTTGTTGCAGAGTGTGCCGGCTGTTTTGAAGAAACAGAGATGCCAGAGGAAAAGGAAGGTAGGGGAAGTGGAGGAAGCGGCTTTCTGTTTGATGGCATTATCCTGTGGCTTTGTTTTCGCTTAG 423 0.5035 MESSSDESSDINKCCTDCKTTKTPLWRGGPAGPKTLCNACGIRYRKRRASPGKRDRTHNSSGGAVDAVTVAVISTSAAATTENQWRESLEMNMVGWDEEVLLQSVPAVLKKQRCQRKRKVGEVEEAAFCLMALSCGFVFA 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0226 140 ProSitePatterns GATA-type zinc finger domain. 15 40 IPR000679 GO:0006355|GO:0043565
Acco06g0226 140 PANTHER OS01G0976800 PROTEIN 4 139 - -
Acco06g0226 140 SMART GATA_3 9 63 IPR000679 GO:0006355|GO:0043565
Acco06g0226 140 ProSiteProfiles GATA-type zinc finger domain profile. 9 45 IPR000679 GO:0006355|GO:0043565
Acco06g0226 140 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 9 49 - -
Acco06g0226 140 Pfam GATA zinc finger 15 48 IPR000679 GO:0006355|GO:0043565
Acco06g0226 140 Gene3D - 11 65 IPR013088 GO:0006355|GO:0008270
Acco06g0226 140 CDD ZnF_GATA 15 48 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0226 Acco-ChrAcco06 1494513 1495712 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0226 1 140 C2C2-Gata Transcription Factor Family AT5G49300 37.589 7.13e-24 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Acco06g0226 GATA 3.4e-17 CL0167