Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0213 ATGTCGGGGGACGGACGGAACAAAAGGAGATTAGCCATCATTGGCGTCTCTTCGGTGTTGCTGGTGGCACTGGTGGTGGCCGTGACGGTTGGCGTGACGTGGAGTAAATCGGAGTCGGACGAGGATGACAGGAGCTCCGACAAGATAGTCTCTAACAAGGTGAAAGCAGTACGGAGTCTGTGCTCGCCCACGGACTACAAGAAAGAATGCGAGGAGAGCCTGGTGGCGGAGGGCGGCAACAGCACCGACCCAAAACAACTCATCATGAGTGCCTTCAACATCACCATCAAGAAGATCGAGAAGGGTATTCATGAATCCGATCTCTTGCACGAGGCCGAGAAGGATCCACGATCCAAGGAGGCCCTCCAAACCTGCAAGCACCTCATGGATCTTTCCATCGGCGAGTTCAGGAAATCACTCGCCACCTTCCAGACCTTCGATTTCTACAGCCTCGACAAGATTCTCATGAACCTCAAGGTCTGGCTCAGCGGCGCCATCACCTACCAGGAAACCTGCATCGAAGGCTTCGAGGAAGTCAAAAGCGACGCCGGTCTCAAGATGAAGCAGGCCCTCACATCCGCCATGCACATGAGCAGCAACGGACTCGCCATCGTCAACGACATGGCCGAGGCTTTATCCAGCTTGCACATCACAAAACAAGGAAGGCGTCTCCTTAATGATCAAGAGGACGCCGCCAGACCCAATGTCGGTGACTTCGATCTCCCCTCGTGGATCGACGAGAATCCTGCCGCTCGGAGGCTGATGACGACGAGCGAGCATAAGGGCAAACTGAAGCCTGATGTGGTGGTGGCCAAGGACGGGAGCGGGAAATACAAGAAAATCAAAGACGCGCTGAAGCGCGTGCCCAAGAAGAACAAGAAGCCGTTTGTGATCTACATCAAGGAAGGGGAGTACAAAGAGCAGGTGGAGGTGGAGAAGCACATGACGTACGTTGTGTTCGTTGGAGATGGCGGCAACAAGACCCGCATCACCGGCAAAAAGAACTTCGCCGATGGGGTCGGCACCTACAAGACCGCTACGGTGGCCGTAGAAGGGGACAACTTCATCGCCATCAACATGGGGTTCGAGAACTCAGCCGGTCCCGACGGACATCAGGCCGTGGCACTCAGGGTTCAGTCCGACTTCTCCATATTCTACAAATGCCAAATAGATGGGTACCAGGACACGCTTTACGTGCACACCATGCGTCAGTTCTACAGGGACTGCGTCATCACCGGCACCATAGACTTCATCTTCGGTGATGCCGCCGTCGTCATGCAGAACTGCACATTCGTGGTGAGGAAGCCGAACGAGAACCAGCAGTGCATAGTGACGGCACAGGGTAGGAAGGAGAGGCACCAGCCGTCGGCGCTGGTGATCCAGGGAGGGTCCATAGTGTCGGACCCAAAGTACTACAAAGTGAGGTTCGAGAACAAGGCTTACCTGGCGCGTCCATGGAAGAACTTCTCCAGGACTATCATAATGGAAACCTTCATAGACGACCTGATTCAACCAGAGGGATTTCTCAAGTGGGACGCCAACTCCACATCCGACAGGACATGCTGGTACGGTGAGTTCAACAACACAGGGCCAGGTGCCGACATGAGTAATCGCGCCAAGTGGAACGGGATCAAGAATCTGACGGCTCAGCATTCTCTGGATTTCACGCCCCTGAGGTACTTCAAGACAGATTACTGGATTAGGGACACTAGAATTCCTTACAATTCCGGCCCCATGTACCTCCCTGCCCTTAATTCCAAAAAGATCTCCTCTCACTGA 1779 0.5424 MSGDGRNKRRLAIIGVSSVLLVALVVAVTVGVTWSKSESDEDDRSSDKIVSNKVKAVRSLCSPTDYKKECEESLVAEGGNSTDPKQLIMSAFNITIKKIEKGIHESDLLHEAEKDPRSKEALQTCKHLMDLSIGEFRKSLATFQTFDFYSLDKILMNLKVWLSGAITYQETCIEGFEEVKSDAGLKMKQALTSAMHMSSNGLAIVNDMAEALSSLHITKQGRRLLNDQEDAARPNVGDFDLPSWIDENPAARRLMTTSEHKGKLKPDVVVAKDGSGKYKKIKDALKRVPKKNKKPFVIYIKEGEYKEQVEVEKHMTYVVFVGDGGNKTRITGKKNFADGVGTYKTATVAVEGDNFIAINMGFENSAGPDGHQAVALRVQSDFSIFYKCQIDGYQDTLYVHTMRQFYRDCVITGTIDFIFGDAAVVMQNCTFVVRKPNENQQCIVTAQGRKERHQPSALVIQGGSIVSDPKYYKVRFENKAYLARPWKNFSRTIIMETFIDDLIQPEGFLKWDANSTSDRTCWYGEFNNTGPGADMSNRAKWNGIKNLTAQHSLDFTPLRYFKTDYWIRDTRIPYNSGPMYLPALNSKKISSH 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0213 592 CDD PMEI-like_3 59 209 - -
Acco06g0213 592 PANTHER PECTINESTERASE 20 568 - -
Acco06g0213 592 NCBIfam pectinesterase inhibitor domain 39 207 IPR006501 GO:0004857
Acco06g0213 592 FunFam Pectinesterase 53 209 - -
Acco06g0213 592 FunFam Pectinesterase 261 578 - -
Acco06g0213 592 SUPERFAMILY Pectin lyase-like 265 575 IPR011050 -
Acco06g0213 592 Gene3D - 261 578 IPR012334 -
Acco06g0213 592 Gene3D Invertase/pectin methylesterase inhibitor family protein 52 209 IPR035513 -
Acco06g0213 592 Pfam Plant invertase/pectin methylesterase inhibitor 56 204 IPR006501 GO:0004857
Acco06g0213 592 ProSitePatterns Pectinesterase signature 2. 411 420 IPR033131 -
Acco06g0213 592 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 56 208 IPR035513 -
Acco06g0213 592 Pfam Pectinesterase 267 562 IPR000070 GO:0030599|GO:0042545
Acco06g0213 592 SMART PMEI_2 52 204 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0213 Acco-ChrAcco06 1432849 1434627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0213 4 577 Carbohydrate Esterase AT3G05610 47.826 0.0 585