Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0212 ATGAACCTCCCACTGCAAATCCATCATACGTTTAACCTGCAACTGCACCAAACTACCATCATCCCCTTCCTTTCCATTCTTCAGATCTTGAACCACTTCCAATTGATCCGGCCTAGATCCGGCTTTAAAAATCACAAAAACCCTAACTTCTCTTCTTCTTCTTCCCAGCGTGAAGGGCAGAGAGAGATTGTCAGCCCGGCAACAATGGGGATCGATCTCAAAGCTGGTGGGAAGAGCAAGAAGACCAAAAGAACGGCACCCAAGTCCAATGATATCTACCTCAAGCTTCTTGTCAAGCTTTATCGCTTTCTAGTCCGGAGAACTGAAAGCAGTTTCAATGCTGTGATACTCAAGCGTCTTTTCATGAGCAAAGTCAACAAGGCTCCGCTTTCTTTGTCAAGATTGATAAAGTTCATGAAGGGGAAGGAAGATAAGATTGCAGTGTTGGTGGGTACAGTGACTGATGATATACGAGTTTATGAAGTTCCGCCTTTGAAAGTTGCTGCACTCCGGTTTACAGAGACAGCGCGTGCAAGGATAGAGAAGTCTGGTGGCGAGTGCTTGACTTTTGATCAGCTGGCTCTCAGGGCTCCTCTGGGACAGAACACGGTCCTTCTTAGAGGCCCAAAGAATTCTCGTGAAGCTGTGAAGCATTTTGGTCCTGCTCCTGGTGTGCCACACAGCCACACCAAGCCTTATGTGCGATCGAAGGGAAGGAAGTTTGAGCGTGCTAGAGGAAGGAGGAACAGCAAAGGATTCAGGGTATAA 768 0.4727 MNLPLQIHHTFNLQLHQTTIIPFLSILQILNHFQLIRPRSGFKNHKNPNFSSSSSQREGQREIVSPATMGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTESSFNAVILKRLFMSKVNKAPLSLSRLIKFMKGKEDKIAVLVGTVTDDIRVYEVPPLKVAALRFTETARARIEKSGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGRRNSKGFRV 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0212 255 Gene3D - 69 255 - -
Acco06g0212 255 MobiDBLite consensus disorder prediction 232 255 - -
Acco06g0212 255 Pfam Ribosomal protein 60S L18 and 50S L18e 70 255 IPR021131 -
Acco06g0212 255 FunFam 60S ribosomal protein L18 69 255 - -
Acco06g0212 255 PANTHER 60S RIBOSOMAL PROTEIN L18 69 255 IPR000039 GO:0003735|GO:0005840|GO:0006412
Acco06g0212 255 SUPERFAMILY Ribosomal proteins L15p and L18e 88 207 IPR036227 -
Acco06g0212 255 MobiDBLite consensus disorder prediction 219 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0212 Acco-ChrAcco06 1427068 1429615 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0212 71 255 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 78.495 3.55e-104 298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g0212 06 1427068 1429615 Acco06g0212 06 1427068 1429615 CCT
Acco06g0212 06 1427068 1429615 Acco06g0212 06 1427068 1429615 ECH