Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0198 ATGACTTCTGCGTGCACCAAAATGTGTTCCATCTTCTTCGTCATCCTTTTCATCTTGATGCTCCTATCTTTTCAGAAAACCCACATTTTATCTGTGGATGCTCTGTTTCACCCAGCTGGAAACTTCCATATCCATGTCCTATCAGAGAACGGACAAGAAAATGAAAACGAGGTTATGAAAATCTCTGGGCTAGATGAGAATGATGGAAAGGGGCTTCTGATAGTGGAGAAGTTCAGAGTTTTGCTTGGACTCTACAGTTTCCAAACCAGAAGGTCCTCCAATGTCGATTCTGAGTTTCTCTCTCCATCACCTTCTCCTTCACCAAACATTGAACTTGAGGCTCCTTCTCCATCGCCATCGCCATCTCCATCTCTTCTTCCGTTACCACATGTATATGCTCACCCCTTTCCTCCACGACATCGTTCCCATTTTAATCCATCAACTCGCAAGTCTCAACATAAAGATAGAGGCAGAGCTCAAGCAATACTAGTTGGTGTTCTTGTGTCTGTGGGGGTTGCTACAGTGATGTGTGCTCTTGGGCTCTTCTGGTATTTCAGAAAATGCAGAAAGCATGCCAGGAGACCCAAAAGGACAATGCCACTCTGTAGCACGAACGGAGGAAGTGGAGGTGCTTATTCGTCAAGTCAGGTGGGTTTGAACTCTGACCCAGATCTATTTTATCTGAATGCTTTATGCGACGATATAGAGCAACACGCCTGCAGCTTGAAACAAACTTCTGAAACAGTAATCACAAGTCCAAATCATAGCTCCATCCCAAAATGTGCAATTTATGAGAAGGTGGAATTAAATCAAGAAGTGATCAGTTCAGGATATGATAATGCTAGCACTTCTTCCACGAAGGAAATTCTATCTATTCACGAGGATGCTGAATCAGTGAAACATGAATCCGAATCTGACGATCGTGGAGATAAAATTACTACCATGGAACGCCAATCATCAGAGACTGAAAGTTTTCATTCATTCGCCGATTCCCAATCATCAAATGTCAGACTTTCCGATGCTTCGGCGGCCAGTGTGACCGAGACAGTGTCTCCATCGCCTCGAGCATCTCAGTCTAATTCTATCAGTTCGCCAATTCCATTCACAGAGGAAATTACTCATTCGCCTCAAACTTCAAAGATAGAATCTCCTCAATCACCATGTATAACAAAGCAGGAAGAGCAAAAGATTGAATCTTGTTCACGACGTCCTCAAGCCACCACACGTCCGCCGCCACCCCCGATTCTGCAAACGCCTTTGTTTTCTTTGCATTCTCTTACTTCTTCATCAAGAATTCCCTCCGACTCTCCACTTTCTTTATCATCTCCAAGAAGCTCGGATTCTAACTCAGCATTGAATCGAAGTGGAGAAAATCAGTCGCCTTGTCCTCTTCGATCGCCACCTACCGTTCCCCCACCACCATGTCCACCACCGCCCTTCAAAGGTAATAACAACAATGTGAAAACTCCACCTCCTCCGCCATCTCAGCTTCCCCAGTTTACGCCGCTGGGAAAAGATGGAGCTCCACTACCAAAACTTAAACCACTTCACTGGGACAAAGTAAGAGCTGCCCCGGATCGCACAATGGTTTGGGACAAGCTGCGAACAAACTCATTTGAGTTTGATGAGGAAATGATTGAGTCACTTTTTGGCTACAATTTGCAAAATTCAATGAAGAACGATGAGACAAAGAACAAAAGTCCTTCTCCAAGCAAACACCTACTAGAGCCAAAGAGGCTGCAGAACATTACAATTCTCTCAAAAGCTCTGAATGTGACAGCCGAACAATTATGTGAAACCCTAATACAAGGTAAGGGCCTCGCTTTACAACAATTGGAGGCCCTGGTGAAGATGGTACCCACCAAGGAAGAAGTGGAAAAGATCTCGAATTACAAAGGAGACATCAATGACTTGGGATCGGCAGAAAAGTTTGTAAGAGCAATGCTGAGCATACCTTTTGCCTTTCAACGTGTTGAAGCCATGCTTTACAGAGAAACCTTTGAGGATGAGATTGTCCACCTCAGGAACTCTTTTTCAATGCTCGAGGAGGCGTGCAAGGAACTAAGATCAAGCAGGCTTTTCTTGAAGTTGCTTGAAGCTGTGCTGAAAACAGGAAACCGTATGAACGTTGGGACAATAAGAGGAGGTGCCCGAGCATTCAAGCTCGATGCCCTTCTCAAGCTAGCTGATGTTAAGGGAACCGATGGAAAGACTACGTTACTCCATTTTGTAGTTCAGGAGATTGTCAGATCAGAAGGAATCAGAGTTTCGGATAGCATTATGGGGAAAATCAGCCAGAAAAGTAAGAACAGAACAGAAGAAGAGAAGGAAGATGATTACAGAAGAATGGGATTAGAACTTGTTTCTGGTTTGAGTACTGAGTTATACAACGTAAAGAAGACGGCGACAATCGACTTGGACGTTCTTGCCAGCTCTGTCTCGAACCTCAAAGACGGAATGGCTAAGCTGCAATATGTCGTACAGGAGTTACATGCGGATGAAAGAAGTGAGAACTTTGTGAATTCTATGAAGGCTTTCCTAAATTATGCAGAGAGAAATGTAAGGGAGCTGCAAGGAGATGAAGATAGAGTGCTAGCTCGTGTGAAAGAAATCACAGAGTATTTTCACGGGTATGTGAGCAAAGAAGATGCAAATCCACTTCGGATATTTGTGATTGTAAGAGACTTTATGGGCATGTTGGATAATGTATGTAAAGAACTCAGAAAGTCCAAAGCCCCCCGCACCCCAAATCCTCTTGCTCCGTTCAGGTAG 2772 0.4416 MTSACTKMCSIFFVILFILMLLSFQKTHILSVDALFHPAGNFHIHVLSENGQENENEVMKISGLDENDGKGLLIVEKFRVLLGLYSFQTRRSSNVDSEFLSPSPSPSPNIELEAPSPSPSPSPSLLPLPHVYAHPFPPRHRSHFNPSTRKSQHKDRGRAQAILVGVLVSVGVATVMCALGLFWYFRKCRKHARRPKRTMPLCSTNGGSGGAYSSSQVGLNSDPDLFYLNALCDDIEQHACSLKQTSETVITSPNHSSIPKCAIYEKVELNQEVISSGYDNASTSSTKEILSIHEDAESVKHESESDDRGDKITTMERQSSETESFHSFADSQSSNVRLSDASAASVTETVSPSPRASQSNSISSPIPFTEEITHSPQTSKIESPQSPCITKQEEQKIESCSRRPQATTRPPPPPILQTPLFSLHSLTSSSRIPSDSPLSLSSPRSSDSNSALNRSGENQSPCPLRSPPTVPPPPCPPPPFKGNNNNVKTPPPPPSQLPQFTPLGKDGAPLPKLKPLHWDKVRAAPDRTMVWDKLRTNSFEFDEEMIESLFGYNLQNSMKNDETKNKSPSPSKHLLEPKRLQNITILSKALNVTAEQLCETLIQGKGLALQQLEALVKMVPTKEEVEKISNYKGDINDLGSAEKFVRAMLSIPFAFQRVEAMLYRETFEDEIVHLRNSFSMLEEACKELRSSRLFLKLLEAVLKTGNRMNVGTIRGGARAFKLDALLKLADVKGTDGKTTLLHFVVQEIVRSEGIRVSDSIMGKISQKSKNRTEEEKEDDYRRMGLELVSGLSTELYNVKKTATIDLDVLASSVSNLKDGMAKLQYVVQELHADERSENFVNSMKAFLNYAERNVRELQGDEDRVLARVKEITEYFHGYVSKEDANPLRIFVIVRDFMGMLDNVCKELRKSKAPRTPNPLAPFR 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0198 923 Pfam Formin Homology 2 Domain 507 900 IPR015425 -
Acco06g0198 923 MobiDBLite consensus disorder prediction 137 156 - -
Acco06g0198 923 MobiDBLite consensus disorder prediction 108 128 - -
Acco06g0198 923 MobiDBLite consensus disorder prediction 293 317 - -
Acco06g0198 923 MobiDBLite consensus disorder prediction 318 394 - -
Acco06g0198 923 ProSiteProfiles Formin homology-2 (FH2) domain profile. 503 923 IPR015425 -
Acco06g0198 923 SMART it6_source 503 915 IPR015425 -
Acco06g0198 923 MobiDBLite consensus disorder prediction 420 463 - -
Acco06g0198 923 MobiDBLite consensus disorder prediction 293 513 - -
Acco06g0198 923 SUPERFAMILY Formin homology 2 domain (FH2 domain) 516 911 - -
Acco06g0198 923 PANTHER FORMIN-RELATED 14 915 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Acco06g0198 923 Gene3D Formin, FH2 domain 527 916 IPR042201 -
Acco06g0198 923 MobiDBLite consensus disorder prediction 95 128 - -
Acco06g0198 923 MobiDBLite consensus disorder prediction 464 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0198 Acco-ChrAcco06 1351236 1354549 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0198 488 923 FH2 protein (formin) Gene Family AT3G05470 74.091 0.0 670
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g0198 06 1351236 1354549 Acco06g0198 06 1351236 1354549 CCT
Acco06g0198 06 1351236 1354549 Acco06g0198 06 1351236 1354549 ECH