Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0193 ATGGACCATGCTCGATCGACCTCGGGGAATGCCGAGGATAGCATAGGGATTCCAGATGACTTGCGATGTAAGAGGTCGGATGGGAAACAGTGGAGATGTACTGCAATGTCCATGCCAGATAAAACTGTCTGTGAGAAGCATTATATCCAGGCAAAGAAGAGGGCAGCTAATTCTGCCATGAGAGCTAGTCTTAAGAAGGCTAAGAGAAAGTCATTAGGTGAGAGTGACATTTATCTAGAGAGCAAGAGTGAGGATGTTGACATGCCACTCGCAAGCATGAAAGTCGAACAGCATTCGGGCTCTGGAAAGAACAAGGCATCAAAAAATCAGTTCCGATATACAGCAGAGACACCAACCACAAGGACCCCCTCTGGACGCAATGCCCCAAAGCTAAATGACGATTCACAAGATGATATTCCCCAGTATGAAGAAAATTGGACGTCTTATGAGTCACCACCTGCTTCTCGAATGGACTTGTCGAGGAAAAGATCTCAAAGAAATTTAGATGCCAATGCTGCTACAGAATACTCGGACGGACGGACAGATTCGTCTGATGACACTGGTGGGCAAACTTGCCATCAATGTCGAAGGAATGACAGAGACAGAGTTATTTGTTGTTTAAGATGTGATAAGAGAGGATACTGTGAGAGCTGTATATTAACATGGTATTCAGACATGTCATTGGACGAAATTCAGATGACTTGTCCTGCCTGTCGTGGCACCTGTAATTGCAAAATTTGCTTACGCGATGATAATTCAATCAAGGTTCGGATTCGGGAGATACCTGTTCTAGACAAGTTACAATATCTTCACGTGCTGCTGTCATCAGTACTTCCTGTGGTAAAGCAGATCCATCATGAGCAGTGTTATGAAGTTGAACTTGAAAAGAAGTTGCGTGGGATTGAAATAGATCTTCCCAGGACAAAACTGAATGCAGATGAGCAAATGTGCTGTAATTTCTGTCGGATACCCATTACTGATTATCACCGACACTGCCCAAATTGTACATATGATTTATGCCTTAATTGCTGTCAAGATCTTCGAGAGGCAAATGTAAATCCAGAAAAAATAAACCCAACAGATGAAGCAAAACTTTCAAATCAAAATTTGCTATATAAGTTGCCTGAGTGGAGATCCAATAGTGATGGTAGCATTCCATGCCCCCCAAAGAAATATGGTGGCTGTGGTTATTCACCGTTGATTTTAAGCCGCATCTTCAAGATGAATTGGGTTGCAAAATTGGTGAAAAATGCGGAGGAGATGGTTAGTGGCTGCCAGATTAATGAAGTTGGAGGATCGGAAACCAATATGAATGATCTCAAACTTTACCAATATTCTCACAGGGAGGCCAGTGATGATAATTGTCTGTACTGTCCAGCATCTGAAGATCTCAAAACTGATGGGATAGTAAATTTCAGAAAGCACTGGAAAAATGGTGAACCCATAATTGTCAAGCAAGTATTTGATAGGTCATCAAGCTGGGATCCAATGGCCATATGGAGAGGAGTTCGAGAGACAGCAGATGAGAAAATGAAAGAAGCTGAGAACAGAGTGGTTAAGGCTCTGGATTGTTTAACCTGGTCAGAGATAGATATCGAACTCAATGAATTCATGAAAGGGTACTTTGAGGGGCGTACCCATGAGAATGGTTTGCCACAATTATTGAAGTTGAAGGATTGGCCTTCACCTAGTGCATCTGAAGAATTTTTATTGCATCAAAGACCTGAATTTATCCGCAAGCTGCCTTTACTAGAATATATTCACTCAAAGTGGGGCCTTCTTAATGTTGCCGCTAAATTGCCTCATTACTCCTTACAAAATGACGTAGGACCCAATATTTATATATCATATGGGGCCAATGAGCAACTTGGTATTGGTGACTCAGTGACCAATCTCCACTTCAATATGCGTGACATGGTCTATCTTTTGGTCCATACAAGTGAAGTGAAGCCGAAGAACTTGCAGGGAACAAAAAGTGAAAAGATACAGAAATCATCTGATGAAAATGAATTGCCTGTGGATCCACAAATATGTTCAGTGGGGAGTCCAGCTGATTCATCACTGGGCACAGAAAAAAAGGGACTGGATTCGGATTCAAATGAGAAAACATCAATTATAAATAAAGGGTTTGAAAATTATTCTAGTGCACAAGGGCATATGATCAATTCTGAGTTTCCGGTCAAGGATGGAGATGTCGGGGAGAAAACAGATCCTGGAGTTCTTTGGGATGTCTTTCGTCGGCATGATGTTCCAAAGCTAACTGAATTTCTAAAAGCACATTGGGAAGAATTTACGCAGCCAGATGATATAGTAAATAAATTTGATGCAAGGCCTCTTTATGATGGAGTTATTTTTCTTAACAGACGCCATAAAAGGAAGTTGAAGGAAGAATTTGGAGTGGAGCCATGGTCATTTGAACAGTATGTGGGGGAAGCCGTATTTGTTCCTGCAGGGTGCCCTTTTCAAGCAAGGAATGTTCAGTCCACTGTTCAGCTGGGCCTTGATTTCTTATCACCGGAAAGCCTGGGGGAGGCTGTGAGATTGGCTGAGGATGTCCGCTGTCTGCCAAATGAACATGAAGCCAAGCATCAAGTATTGGAGGTTGGGAAGATTTCGCTTTATGCCGCTAGTTCAGCTATCAAAGAAGTTCAGAAACTCGTTCTTGACCCAAAACTTGGCGCAGAGATTGGATTTGGGGACCCTAAGTTGACTGCAATGGTTGCTGAGAACTACGAGAAGATGATTAAGCGAAGTCAGATTTCTTGTGCTTGA 2772 0.4232 MDHARSTSGNAEDSIGIPDDLRCKRSDGKQWRCTAMSMPDKTVCEKHYIQAKKRAANSAMRASLKKAKRKSLGESDIYLESKSEDVDMPLASMKVEQHSGSGKNKASKNQFRYTAETPTTRTPSGRNAPKLNDDSQDDIPQYEENWTSYESPPASRMDLSRKRSQRNLDANAATEYSDGRTDSSDDTGGQTCHQCRRNDRDRVICCLRCDKRGYCESCILTWYSDMSLDEIQMTCPACRGTCNCKICLRDDNSIKVRIREIPVLDKLQYLHVLLSSVLPVVKQIHHEQCYEVELEKKLRGIEIDLPRTKLNADEQMCCNFCRIPITDYHRHCPNCTYDLCLNCCQDLREANVNPEKINPTDEAKLSNQNLLYKLPEWRSNSDGSIPCPPKKYGGCGYSPLILSRIFKMNWVAKLVKNAEEMVSGCQINEVGGSETNMNDLKLYQYSHREASDDNCLYCPASEDLKTDGIVNFRKHWKNGEPIIVKQVFDRSSSWDPMAIWRGVRETADEKMKEAENRVVKALDCLTWSEIDIELNEFMKGYFEGRTHENGLPQLLKLKDWPSPSASEEFLLHQRPEFIRKLPLLEYIHSKWGLLNVAAKLPHYSLQNDVGPNIYISYGANEQLGIGDSVTNLHFNMRDMVYLLVHTSEVKPKNLQGTKSEKIQKSSDENELPVDPQICSVGSPADSSLGTEKKGLDSDSNEKTSIINKGFENYSSAQGHMINSEFPVKDGDVGEKTDPGVLWDVFRRHDVPKLTEFLKAHWEEFTQPDDIVNKFDARPLYDGVIFLNRRHKRKLKEEFGVEPWSFEQYVGEAVFVPAGCPFQARNVQSTVQLGLDFLSPESLGEAVRLAEDVRCLPNEHEAKHQVLEVGKISLYAASSAIKEVQKLVLDPKLGAEIGFGDPKLTAMVAENYEKMIKRSQISCA 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0193 923 Gene3D Cupin 452 862 - -
Acco06g0193 923 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 19 887 IPR045109 GO:0032454|GO:0033169
Acco06g0193 923 ProSiteProfiles JmjC domain profile. 563 853 IPR003347 -
Acco06g0193 923 MobiDBLite consensus disorder prediction 94 194 - -
Acco06g0193 923 SMART cupin_9 570 853 IPR003347 -
Acco06g0193 923 MobiDBLite consensus disorder prediction 97 130 - -
Acco06g0193 923 Pfam WRC 18 58 IPR014977 -
Acco06g0193 923 MobiDBLite consensus disorder prediction 166 191 - -
Acco06g0193 923 MobiDBLite consensus disorder prediction 654 702 - -
Acco06g0193 923 MobiDBLite consensus disorder prediction 1 21 - -
Acco06g0193 923 SUPERFAMILY Clavaminate synthase-like 473 862 - -
Acco06g0193 923 ProSiteProfiles Zinc finger RING-type profile. 192 239 IPR001841 -
Acco06g0193 923 MobiDBLite consensus disorder prediction 654 668 - -
Acco06g0193 923 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 185 252 IPR018866 -
Acco06g0193 923 ProSiteProfiles WRC domain profile. 17 61 IPR014977 -
Acco06g0193 923 Pfam JmjC domain, hydroxylase 738 832 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0193 Acco-ChrAcco06 1318856 1324775 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0193 18 58 GRF Transcription Factor Family AT3G13960 46.341 2.67e-06 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Acco06g0193 JmjC 2.7e-08 CL0029
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g0193 06 1318856 1324775 Acco06g0193 06 1318856 1324775 ECH