Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0181 ATGCAATTAAATTGCTTAAATTCATTGGAAAATACTGCCTTTCATCTTTATTTTAGGCATATATATGGTTCCTCACTACTCTCACTCAAGACAACACAGACACCAATGCAAATGCAAGACATTTTTGGATCAGTTCGCAGATCGCTGGTGTTTCGTACTACGCCGGAGAACGAAGAAGCCTCACTTGGAGGAACCCTAGTTGATAAGATCAATTCTTGCATTCGCAAGTCCAGAGTCTTCTCTAAACCTTCTCCCGCGTCTCCGCCAATGCCACCCGTCACAAAGGAACCTTCGCCGATGATCCGATGGCGCAAGGGCGAGTTGATCGGATGCGGTGCCTTTGGCCGAGTTTACATGGGCATGAATCTTGATTCTGGAGAGCTTCTAGCAGTTAAACAGGTTCTGATCGCGGCTAGCAGTGCTTCGAAGGAGAAGGCTCAGGCTCAAATAAAGGAGCTTGAGGAAGAAGTTAAGCTTCTTAAAGATCTTTCTCATTCCAATATTGTTAGATATTTAGGTACAGTTAGGGAGGAGGACACCTTAAATATTCTTCTGGAGTTTGTACCAGGTGGATCCATATCATCACTTTTGGGGAAGTTTGGAGCTTTCCCTGAGGCTGTTATTAGAACTTTCACGAAGCAGTTACTGCTGGGACTTGAGTACTTGCACAAAAATGGAATTATGCACAGGGACATTAAGGGGGCAAATATCCTTGTGGATAATAAAGGGTGCATTAAACTTGCAGATTTTGGGGCGTCCAAACAGGTCGTTGAGCTGGCTACCATTTCCGGTGCCAAGTCTATGAAGGGCACTCCATATTGGATGGCTCCTGAAGTTATTCTCCAGACTGGGCATAGCTTCTCGGCTGATATATGGAGTGTTGGCTGTACTGTGATTGAAATGGCCACTGGAAAACCTCCCTGGAGCCAGCAGTACCAAGAGGTTGCCGCTATCTTCCACATAGGAACAACAAAGTCTCATCCACCAATTCCGGATCATCTCTCTGTTGGAGCAAAAGATTTTCTATTAAAATGTTTGCAGAAGGAACCAGTATTAAGGCCATCAGCATCAGAACTGCTGCAGCATCCTTTTGTTACTGGTGAACAATTGGGTTCATTTCCTGGGTCATATACCCCAATGGGAAAATTTGAAGCTTCTTCAACAACTTGGTCCTCAAACATCGAACCTACCTCAACTATACCTCCTGAGGAAGAAAATAAAGACTATTGGGGAATGGGCAATGATGACGACATGTGTGAGATTGATGACAAAGATGAGTTATCTAAGGGGGCTGTTAAATTTAGATCCTTGATGTCAGAAGAAATTACGAGTTTCAACCCACTGTCTGATCCCTCTGATGATTGGAGTTGCAAATTTGTTGTGAGTCCAGAACTGGATCGTAGTGGAGTTAGTATTAGCACTGACGAAATGTTCAAGCCTTCTGACCACCTGGAGGCTTCCCATGAGGAACACACAGATTTTTCCTTTTCAGGTGAACAATCAGTGTCTGAGGATGATGATGAGCTCACGGAGTCAAAAATACAAGCTTTTTTGGATGAGAAGGCTCTAGGACTGAAAAAACTGCAGACCCCTTTATATGAAGAGTTCTTCAACAGTTTAAATACATGTTGTTCTCCCAATGCGATTGAAAACACAAATGATGAAACTACTCCAAAGTTCTTGAAATTACCTCCGAAAAGCAGGTCCCCGAGTCGGGCACCAATTGGCACCCCACCAAAAGCAGTTGACCATACTGAAAGTCCTGGAAGTACTGGCAGGTCCTCCCCAAATGTAGGGAATGCACCTGATCATAATTCACAGAACAAACCATCACCGCCCCTCGATGAATGGAAAGGATTGCCAGTTGATTCCCAGCAGGAGCCTTGTAGCCCAAGTTTAAGCTTTTCTGAGAGACAGAGGAAGTGGAAAGAAGAACTTGATCAGGAACTCGAGAGAAAGCGCGAAATGATGCGTCATGCTGGCATAGGCGGGAAAACATCATCACCAAAGGATCGAGCCTTAAACCGGCAGAGAGAACGGACAAGATTTGCATCACCCAGCAAATGA 2067 0.4456 MQLNCLNSLENTAFHLYFRHIYGSSLLSLKTTQTPMQMQDIFGSVRRSLVFRTTPENEEASLGGTLVDKINSCIRKSRVFSKPSPASPPMPPVTKEPSPMIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAASSASKEKAQAQIKELEEEVKLLKDLSHSNIVRYLGTVREEDTLNILLEFVPGGSISSLLGKFGAFPEAVIRTFTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKQVVELATISGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQYQEVAAIFHIGTTKSHPPIPDHLSVGAKDFLLKCLQKEPVLRPSASELLQHPFVTGEQLGSFPGSYTPMGKFEASSTTWSSNIEPTSTIPPEEENKDYWGMGNDDDMCEIDDKDELSKGAVKFRSLMSEEITSFNPLSDPSDDWSCKFVVSPELDRSGVSISTDEMFKPSDHLEASHEEHTDFSFSGEQSVSEDDDELTESKIQAFLDEKALGLKKLQTPLYEEFFNSLNTCCSPNAIENTNDETTPKFLKLPPKSRSPSRAPIGTPPKAVDHTESPGSTGRSSPNVGNAPDHNSQNKPSPPLDEWKGLPVDSQQEPCSPSLSFSERQRKWKEELDQELERKREMMRHAGIGGKTSSPKDRALNRQRERTRFASPSK 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0181 688 Pfam Protein kinase domain 104 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0181 688 SMART serkin_6 103 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0181 688 Gene3D Transferase(Phosphotransferase) domain 1 102 383 - -
Acco06g0181 688 FunFam Mitogen-activated protein kinase kinase kinase 2 102 392 - -
Acco06g0181 688 ProSitePatterns Protein kinases ATP-binding region signature. 109 132 IPR017441 GO:0005524
Acco06g0181 688 MobiDBLite consensus disorder prediction 387 408 - -
Acco06g0181 688 FunFam Serine/threonine-protein kinase STE11 99 193 - -
Acco06g0181 688 MobiDBLite consensus disorder prediction 637 660 - -
Acco06g0181 688 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 84 374 - -
Acco06g0181 688 CDD STKc_MAPKKK 102 365 - -
Acco06g0181 688 SUPERFAMILY Protein kinase-like (PK-like) 102 366 IPR011009 -
Acco06g0181 688 MobiDBLite consensus disorder prediction 587 612 - -
Acco06g0181 688 Coils Coil 136 163 - -
Acco06g0181 688 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Acco06g0181 688 MobiDBLite consensus disorder prediction 550 688 - -
Acco06g0181 688 MobiDBLite consensus disorder prediction 671 688 - -
Acco06g0181 688 MobiDBLite consensus disorder prediction 484 508 - -
Acco06g0181 688 ProSiteProfiles Protein kinase domain profile. 103 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0181 Acco-ChrAcco06 1241539 1248708 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0181 38 688 MAP Kinase Kinase Kinase AT1G54960 57.205 0.0 687
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Acco06g0181 Pkinase 8.2e-71 CL0016