Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0174 ATGGGTGTTGATCTGGAATCGTTGGCGGAGGCGACCTCTGGCGCCATAGGATCACTCTTGAGCACGACCATTTTGTACCCGCTTGACACCTGTAAGACAAAGTACCAAGCCGAGGCTCGGGCTCATGGCCACCAAAAATACAGGAACCTCTCTGATGTGTTATGGGAAGCAATATCTTCCCGTCAGGTGCTTTCCCTTTATCAGGGTCTGGGAACAAAAAACCTTCAATCCTTCATTTCACAGTTTGTCTACTTCTATGGCTACAGCTACTTCAAAAGAATGTATCTGCGGAAGAGCGGTTCTAAAAGTATTGGAACCAAAGAAAACTTGGTCATTGCTGCTGCTGCTGGGGCCTGCACTGCGATTGTGACTCAGCCCCTGGATACAGCCTCTTCAAGGATGCAGACTAGTGATTTTGGAAAATCTAAAGGTCTTCTGAAGACCCTTACAGAGGGCACTTGGAGTGATGCCTTTGATGGTCTTGGAATTTCCTTACTGCTGACCTCAAACCCTGCAATTCAGTATACAGTTTTTGATCAGCTGAAACAACGAGCCCTGAAGAATCAACAAAACAGTGTAGACAGAGGATCAGCATCCCTTTCTGCATTTATGGCCTTTTTCTTGGGAGCTGTTTCAAAGAGTGTTGCTACTGTCTTAACGTATCCCGCTATCAGGTGCAAGGTGATGATTCAAGCTGCAGACAATGAGCAAAAACCAGCCTCAAAATCACAGAAAAAGTCAGGGAAAACAATTTGTGGAGTTTTCTGTTCTATATGGCAAAGGGAGGGCTTACTGGGTTACTTCAAAGGATTGCATGCTCAAATCTTAAAGACTGTTTTGAGTTCAGCATTGCTTTTGATGATAAAGGAGAAGATCTCAGCCACTACTTGGGTGCTTATACTTGCAATTAGAAGGTTACTGTTTCTCCCAAGGGGTAGAGTAAAAAACCAATAA 954 0.4444 MGVDLESLAEATSGAIGSLLSTTILYPLDTCKTKYQAEARAHGHQKYRNLSDVLWEAISSRQVLSLYQGLGTKNLQSFISQFVYFYGYSYFKRMYLRKSGSKSIGTKENLVIAAAAGACTAIVTQPLDTASSRMQTSDFGKSKGLLKTLTEGTWSDAFDGLGISLLLTSNPAIQYTVFDQLKQRALKNQQNSVDRGSASLSAFMAFFLGAVSKSVATVLTYPAIRCKVMIQAADNEQKPASKSQKKSGKTICGVFCSIWQREGLLGYFKGLHAQILKTVLSSALLLMIKEKISATTWVLILAIRRLLFLPRGRVKNQ 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0174 317 ProSiteProfiles Solute carrier (Solcar) repeat profile. 104 184 IPR018108 -
Acco06g0174 317 Pfam Mitochondrial carrier protein 200 293 IPR018108 -
Acco06g0174 317 Pfam Mitochondrial carrier protein 6 98 IPR018108 -
Acco06g0174 317 Pfam Mitochondrial carrier protein 104 188 IPR018108 -
Acco06g0174 317 FunFam Peroxisomal adenine nucleotide carrier 1 3 296 - -
Acco06g0174 317 Gene3D Mitochondrial carrier domain 4 296 IPR023395 -
Acco06g0174 317 PANTHER PEROXISOMAL ADENINE NUCLEOTIDE TRANSPORTER 1 1 316 IPR045900 GO:0005347|GO:0006635|GO:0015217
Acco06g0174 317 SUPERFAMILY Mitochondrial carrier 7 291 IPR023395 -
Acco06g0174 317 ProSiteProfiles Solute carrier (Solcar) repeat profile. 200 295 IPR018108 -
Acco06g0174 317 ProSiteProfiles Solute carrier (Solcar) repeat profile. 5 94 IPR018108 -
Acco06g0174 317 PRINTS Mitochondrial carrier protein signature 113 135 IPR002067 GO:0055085
Acco06g0174 317 PRINTS Mitochondrial carrier protein signature 20 38 IPR002067 GO:0055085
Acco06g0174 317 PRINTS Mitochondrial carrier protein signature 67 85 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0174 Acco-ChrAcco06 1196309 1198710 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0174 23 310 Chloroplast and Mitochondria Gene Families AT1G25380 27.907 6.01e-14 69.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g0174 06 1196309 1198710 Acco06g0174 06 1196309 1198710 CCT
Acco06g0174 06 1196309 1198710 Acco06g0174 06 1196309 1198710 ECH