Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0161 ATGGAAGCCAATACTACAGTGGATACCATGCAGCCTCATACCCGCCACATAAGTCCACAAAAACAGAACCATAATGCCCATTTCTCATCCGAAACCATTCTCATCATCATCGTGGCTCTGGCCTCCGGATTAGTGCTCATGTTTATCATTTTCTTCATCATGTTCATGTTTCGTCGGCAGAAATGCTCATCCAAGAATGATAACAGAAACAGCGCGGCACTTGATGACATGAGTTGCAGGTTCATGGCTGCGGCCACAATGAACTTTGGCTCTAGTCCAGGTGTGAAGGGAGGTTGTCTTAGTGGGGGCAGCGTGAGCATGAGCAGGGTAGGAGGGTCCAATAAAGTAAGAGGAGTGCAAGTGTTTACGTACAGGGAGCTACAAGAGGCTACACAAGGATTCAATGAAGCAAATGTGATTGGAAAAGGAGGTTCTGGTTCGATTTACAGAGGAGTCTTGAGTGACGGCACTCTTGCTGCAATCAAGCTGCTGCTAAAGCAAGGTAGGCAGGGGGAGCGTGCCTTCCGAATTCAGGTGGATATGCAGAGCCGCCTGCACTGTCCATATTTGGTGGAGTTGCTTGGGTATAGTGCAGACCAGCAACACAGGTTACTCGTATTCGAATTCATTCCCAATGGAACTCTGCATCAGCATCTCCACTCAACTAAGCCCTTGAATTGGTGGACCCGCTTGAGGATAGCCCTTGATTGTGCCAGAGCTCTTGAATTCCTCCATGAACACGCTGTCCCACCGGTAATCCATCGTGACTTCAATTCCCACAACGTTCTACTGGATCACAACCTTCGAGCCAAGATCAACGCTCAGATTTCCACCCCCGCCCTGGGGACCACAGGATATATTGCTCCAGAGTATGCACGTTCAGGGAAGCTTACCACCAAATCAGATGTATACAGCTACGGGGTGGTTCTCTTGGAGTCGCTCACTGGACGTGTGCCGGTTGATATCAAAAGACCTCCTGGAGAACATGTTCTTGTCTCTTGGGCACTTCCGAGGTTAACGAACAGAGAAAAGTTGTTGGAAATGGTTGACCCAGTTCTGCGAGGACACTGTTCGAAGAAGGATCTAATTCAGATAGGTGCAATTGCAGCCATGTGCATACAGCCAGAAGCAGACTACAGGCCGCTTATGACGGATGTGGTGCAGTCGCTAATACCACTTGTGAGGAACAGAAATGCAGCTTCATTTACTTCCCCAAATTAA 1221 0.4865 MEANTTVDTMQPHTRHISPQKQNHNAHFSSETILIIIVALASGLVLMFIIFFIMFMFRRQKCSSKNDNRNSAALDDMSCRFMAAATMNFGSSPGVKGGCLSGGSVSMSRVGGSNKVRGVQVFTYRELQEATQGFNEANVIGKGGSGSIYRGVLSDGTLAAIKLLLKQGRQGERAFRIQVDMQSRLHCPYLVELLGYSADQQHRLLVFEFIPNGTLHQHLHSTKPLNWWTRLRIALDCARALEFLHEHAVPPVIHRDFNSHNVLLDHNLRAKINAQISTPALGTTGYIAPEYARSGKLTTKSDVYSYGVVLLESLTGRVPVDIKRPPGEHVLVSWALPRLTNREKLLEMVDPVLRGHCSKKDLIQIGAIAAMCIQPEADYRPLMTDVVQSLIPLVRNRNAASFTSPN 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0161 406 ProSiteProfiles Protein kinase domain profile. 134 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0161 406 MobiDBLite consensus disorder prediction 1 23 - -
Acco06g0161 406 ProSitePatterns Protein kinases ATP-binding region signature. 140 162 IPR017441 GO:0005524
Acco06g0161 406 PANTHER OS01G0750732 PROTEIN 12 394 - -
Acco06g0161 406 Gene3D Phosphorylase Kinase; domain 1 107 209 - -
Acco06g0161 406 Gene3D Transferase(Phosphotransferase) domain 1 210 403 - -
Acco06g0161 406 SUPERFAMILY Protein kinase-like (PK-like) 115 390 IPR011009 -
Acco06g0161 406 Pfam Protein tyrosine and serine/threonine kinase 138 390 IPR001245 GO:0004672|GO:0006468
Acco06g0161 406 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 210 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0161 Acco-ChrAcco06 1127046 1129286 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0161 118 401 Receptor kinase-like Gene Family AT3G58690 56.908 5.54e-125 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Acco06g0161 PK_Tyr_Ser-Thr 1.9e-30 CL0016