Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0127 ATGGGGTGCGTGATTAGTCGAGAAGTCTCATCTGAGATAACCTCAGAGGTGAAGGAGGAGAGGAATTTGAGCGCTGAATCGAACGGGAAGATAGATGAAAACTCCACAGGGACAGCCGAGGGGGAAGTGGTTGAGGTTCAGAACGTTGGCAACCAAAAGGAAGAGAGAGATGGTGATGATGGGACCCAGGTTCAGCAGCCCCGAAGCAGAAGGAGAAGGTCAAAGCCAAACCCAAGGCTAAGTAACCCTCCAAAGCATTTGCAGGGGGAGCAAGCAGCAGCTGGCTGGCCCCCCTGGCTTACGGCAGTGTGTGGAGAAGCACTCAGTGGGTGGATTCCGCGGAAGGCTGACTCATTTGAGAAAATTGATAAGATTGGGCAAGGAACGTATAGCAATGTGTACAAAGCTAAAGACATGTTGACTGGTAAAATTGTTGCATTGAAGAAGGTTCGATTTGACAATTTGGAGCCTGAGAGTGTGAAGTTCATGGCCAGAGAGATTCTTATTTTGCGAAGATTGGATCATCCCAATGTTGTAAAGTTGGAAGGTTTAGTTACATCAAGAATGTCCTGTAGTTTGTATTTGGTGTTTAATTACATGGATCATGATTTGGCTGGACTTGCTGCGAGCCCAGGAATCAAGTTCACTGAGCCTCAGGTCAAATGTTATATGCACCAACTGTTATCTGGACTTGAGCACTGTCATAACCTTCAAGTACTTCACCGTGATATTAAAGGATCAAATCTTCTTATTGACAATGAAGGAATACTTAAGATAGCTGACTTTGGACTGGCATCTTTCTTTGACCCTAACCGGAAGCTGATGATGACTAATCGTGTAGTCACACTTTGGTATCGACCTCCTGAGTTGCTTCTTGGTGCCATAGAATATGGTGTGGGAGTGGACCTTTGGAGTGCAGGTTGCATTTTGGGAGAGTTACTGGCAGGAAAGCCAATTATGCCTGGTCGCACAGAGGTGGAGCAACTGCATAAGATATACAAACTATGTGGTTCACCCTCAGATGAATACTGGAAGAAGTCAAAGTTGCCTAATGCTACCTTGTTTAAACCTCGAGAGCCTTACAAGAGATCTATACGAGAGACATTTAAAGATTTTCCACCTTCTGCACTTACACTTATGGATACCCTTCTTGCCCTTGATCCAGCAGAACGGAGGACTGCATCAGATGCCCTGAGAAGTGAGTTCTTCACCACGGAACCTTATGCCTGTGATCCTTCTAGTCTTCCCAAATATCCGCCAAGCAAGGAAATGGATGCTAAACGCCGAGATGATGAAGCAAGGAGACAACGAGCTGCAGGCAAAGCTCAGGTTGATGGTGCAAAGAAACACCGAACACGCAATCGAGCTAAACCTAATCCTGCTCCTGAAGCCAACGCTGAGCGTCAATCCAATATTGATAGAAGGCGTCTAATAACCCGTGCAAATGCAAAGAGCAAGAGTGAGAAGTTCCCACCACCGCATCAAGATGGGCAACTTGGCTTTCCTTTGGGATCTTCACATCATATTGATCCAGATATCGTTCCTCCCGATGTCTCTTTTAGTTCAACCACATTTACCTATTCAAAAGAACCATTCCAAGCTTGGTCAGGTCCCATTGCTGCGCCCAAGCAGAAGAAACATGCTTCCGGTGATGCAGTTGATTTGTCCAAACAACGTACAAGTGCCCTCGAGGATAAACGTTAA 1704 0.4595 MGCVISREVSSEITSEVKEERNLSAESNGKIDENSTGTAEGEVVEVQNVGNQKEERDGDDGTQVQQPRSRRRRSKPNPRLSNPPKHLQGEQAAAGWPPWLTAVCGEALSGWIPRKADSFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFNYMDHDLAGLAASPGIKFTEPQVKCYMHQLLSGLEHCHNLQVLHRDIKGSNLLIDNEGILKIADFGLASFFDPNRKLMMTNRVVTLWYRPPELLLGAIEYGVGVDLWSAGCILGELLAGKPIMPGRTEVEQLHKIYKLCGSPSDEYWKKSKLPNATLFKPREPYKRSIRETFKDFPPSALTLMDTLLALDPAERRTASDALRSEFFTTEPYACDPSSLPKYPPSKEMDAKRRDDEARRQRAAGKAQVDGAKKHRTRNRAKPNPAPEANAERQSNIDRRRLITRANAKSKSEKFPPPHQDGQLGFPLGSSHHIDPDIVPPDVSFSSTTFTYSKEPFQAWSGPIAAPKQKKHASGDAVDLSKQRTSALEDKR 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0127 567 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Acco06g0127 567 SUPERFAMILY Protein kinase-like (PK-like) 113 410 IPR011009 -
Acco06g0127 567 Gene3D Phosphorylase Kinase; domain 1 106 201 - -
Acco06g0127 567 MobiDBLite consensus disorder prediction 547 567 - -
Acco06g0127 567 PANTHER CELL DIVISION PROTEIN KINASE 117 407 - -
Acco06g0127 567 FunFam probable serine/threonine-protein kinase At1g54610 202 443 - -
Acco06g0127 567 CDD STKc_CDK9_like 119 403 - -
Acco06g0127 567 Pfam Protein kinase domain 119 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0127 567 MobiDBLite consensus disorder prediction 517 531 - -
Acco06g0127 567 MobiDBLite consensus disorder prediction 49 67 - -
Acco06g0127 567 ProSiteProfiles Protein kinase domain profile. 119 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0127 567 MobiDBLite consensus disorder prediction 468 491 - -
Acco06g0127 567 MobiDBLite consensus disorder prediction 1 92 - -
Acco06g0127 567 FunFam probable serine/threonine-protein kinase At1g54610 106 201 - -
Acco06g0127 567 MobiDBLite consensus disorder prediction 409 567 - -
Acco06g0127 567 SMART serkin_6 119 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0127 567 MobiDBLite consensus disorder prediction 12 27 - -
Acco06g0127 567 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524
Acco06g0127 567 Gene3D Transferase(Phosphotransferase) domain 1 202 443 - -
Acco06g0127 567 MobiDBLite consensus disorder prediction 421 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0127 Acco-ChrAcco06 883274 886692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0127 111 443 Core Cell Cycle Gene Families AT5G10270 53.295 1.21e-124 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Acco06g0127 Pkinase 1.1e-65 CL0016