Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0117 ATGCAGCGGAAGAAAGTCAGAACCGAAATGAAGAACATTTTCAAGAGGCTTCACATTGGCAGCAATCACGATCCTAATCGATCCCATGAAGCTCCTCCTTCCTCCTCCTCCGCAGTAAACCCACAATCTGGCGTCTCCGATCTCCGTATCACTCCTCCTGTTCAAAATTCTGGTACTTCTTTGCCTAGCCCCCCTTCTTCTTCACCATCGCCTTCCCCTGCTCCTCCACCAGCTGGCAGCACTTCCACTCCCCAACCTGCCCAGTCCAATCTTCAAGACTATTTCTCTTCGGAGGAAGAGTTCCAGGTTCAGTTAGCTCTAGCCATCAGCGCATCCAATTCGGAGTTCCGGGATGATCCTGAGAAGGATCAGATCCGAGCAGCAACATTACTGAGCTTAGGAGGTCATCGAACTCATTGCGCAACGAATAAGGATCACGAAGCGGAGGCACTATCTAGGCAGTACTGGGAATACAATGTTCTTGACTATGAGGAGAGAGTGGCAGATGGTTTTTATGATGTATATAGCCTCTGTAATGATGCTGCAATGCAGAAGAAAATGCCATCTCTGGCAGATCTTGAAGGAAATCCTGGAAGTTCTAATTTTGAAATTGTCGTGGTTAATAGAAAGATTGACCCCGTCTTGGAAGAGCTGTTGCAAATTGCCCATTGTATTGCATTAGACTGCCCAGTCACCAAGGTCGGTGTTTTGGTACAAAGGCTTGCTGAACTTGTGACGGGGCATATGGGTGGTCCTGTAAAGGATGCTAATATTGCATTGGCGAAATGGATGGAAGGAAGTACGGAGCTAAGAACATCCCTTCACACAAGCGTATTGCCTCTTGGGTCCATAAATATTGGGCTATCCAGGCATCGGGCTTTGCTTTTCAAGGTATTAGCTGACAATATCAAGATGCCTTGTAGACTGGTAAAAGGCAGTCATTACACTGGTGTTGAGGATGATGCTGTGAACATAATAAAGTTGGATGATGAAAGGGAGTTTTTGGTTGATCTCATGGCTGCTCCTGGAACACTTATCCCAGCTGACTTAAGTGCAAAGGATACTGCCTTTAAGCCATACAACCCCAAGATTTTGCAAAGTTTACAATCCAGTAAAGAAAATGGATTTTCTTACTCAGGAGAAATATCATCTGATGGTGAAGGAAGTAATCATTTTTCTGTGAAAAGAGGTGGTTCATCACCATTGACTGGAAAATTATCTTTTGAGGAATCAGAGATGTCTTCAAAAATGAGCTCAAGCAAAGACAACGGTGCTATTGCTTCCAAAATGCCCAACAGAGGAACTTCCAGCCAATCAGAAAAATTGCCCCCATCAGCTGGGACTTTGATGTACAAGGGGACTCTCGGAATGAATGCAATTGGTGATGGAGCAAGGTTGAATGCCAATATTGTACCATATAGTCAGGATAGCCCAGACAACTCGAGGATCCTTTTTGCAGATCTTAACCCATTCCAGATAAAAGGAACTGGCAAGACCTCTGTACACAACAAACCTGTGGAAAACAAGTCTCCTGAGCTTCAAATTATGAGAGATAATTCTGTCTCTGGCCAACCCCCAGTACCATTGATGTGGAAGAATCGTTATGCTTATAATGAGACTCCCAAACAAATCAATCGTGATCCTAGTGAATATAGTTCCCAATCGTCACATGATTCTGATATAAATAAAAATAGAAATACTCTCAATTTGATGGAAGTCACTGGTTCAGCATTGGCACCTGGTGCAGGTGAGGTAAACAGGGTTGAGGATCTCAAGGAGGACTGTAACAAAAGAAATGGAGTAGGTTTTGAAAATGACATCGTAGGTGTGGCTAAAGAACATGAGAACAATGTACTTGAGTTTCATGACTGGAGAAAGTGCACGCATGACAGATTCATGGGGAGCAATTTGAAATTAGGGGCCTCAGAGCGCCCAAGCTCACCAATTGATTCCATTGGTATAGGGGGTGATCAAATATTGGATGATGTAGATGTGGGTGATTGTGAAATTCCATGGGAGGATTTGATTATTGGTGAAAGAATAGGTCTAGGTTCATATGGTGAGGTATTCCGTGCTGACTGGAATGGCACTGAGGTTGCTGTTAAGAAGTTTCTGGATCAAGACTTTTCAGGCGCTGCACTCGCTGAATTCAAGAGAGAAGTACGGATCATGCGTCGATTACATCATCCAAATATTGTTCTTTTTATGGGTGCTGTTACTCGTCCTCCCAATCTCTCAATCATTTCAGAGTTTCTTCCAAGAGGAAGCTTGTACAAAATTCTTCATCGTCCTAATTGTCAGATTGACGAGAAGCGTAGAATAAAAATGGCTTTGGATGTGGCAAGAGGCATGAACTGCTTGCATACCAGCACACCTACAATTGTTCACCGAGATCTGAAGTCGCCAAATCTTTTGGTTGATAATAACTGGAATGTCAAGGTTTGTGATTTTGGGTTATCACGCTTGAAGCACAGCACATTTTTGTCATCCAAGTCAACTGCTGGAACGCCTGAATGGATGGCTCCTGAAGTTCTCCGCAACGAGCCCTCAAATGAGAAGTGTGACGTTTATAGTTTTGGAGTCATCCTGTGGGAGCTTGCCACTTTAAGGTTGCCATGGAGTGGAATGAACCCTATGCAGGTTGTTGGTGCAGTTGGTTTCCAAAACCGTCGCCCAGAAATCCCCAAGGAAATTGACCCCGTTGTTGCAAGAATAATTTGGGAATGTTGGCAACAGGATCCAAATCTGCGCCCCTCATTTGCGCAGCTCACTGTGGTTTTAAAGTCCCTGCAGCGTTTAGTTATCCCATCTTATCAAGACCAGATGGCTTCGCCTCTGCCACAGGAGATTTCTGTGAATTCCACCCCATAG 2871 0.4427 MQRKKVRTEMKNIFKRLHIGSNHDPNRSHEAPPSSSSAVNPQSGVSDLRITPPVQNSGTSLPSPPSSSPSPSPAPPPAGSTSTPQPAQSNLQDYFSSEEEFQVQLALAISASNSEFRDDPEKDQIRAATLLSLGGHRTHCATNKDHEAEALSRQYWEYNVLDYEERVADGFYDVYSLCNDAAMQKKMPSLADLEGNPGSSNFEIVVVNRKIDPVLEELLQIAHCIALDCPVTKVGVLVQRLAELVTGHMGGPVKDANIALAKWMEGSTELRTSLHTSVLPLGSINIGLSRHRALLFKVLADNIKMPCRLVKGSHYTGVEDDAVNIIKLDDEREFLVDLMAAPGTLIPADLSAKDTAFKPYNPKILQSLQSSKENGFSYSGEISSDGEGSNHFSVKRGGSSPLTGKLSFEESEMSSKMSSSKDNGAIASKMPNRGTSSQSEKLPPSAGTLMYKGTLGMNAIGDGARLNANIVPYSQDSPDNSRILFADLNPFQIKGTGKTSVHNKPVENKSPELQIMRDNSVSGQPPVPLMWKNRYAYNETPKQINRDPSEYSSQSSHDSDINKNRNTLNLMEVTGSALAPGAGEVNRVEDLKEDCNKRNGVGFENDIVGVAKEHENNVLEFHDWRKCTHDRFMGSNLKLGASERPSSPIDSIGIGGDQILDDVDVGDCEIPWEDLIIGERIGLGSYGEVFRADWNGTEVAVKKFLDQDFSGAALAEFKREVRIMRRLHHPNIVLFMGAVTRPPNLSIISEFLPRGSLYKILHRPNCQIDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDNNWNVKVCDFGLSRLKHSTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLRLPWSGMNPMQVVGAVGFQNRRPEIPKEIDPVVARIIWECWQQDPNLRPSFAQLTVVLKSLQRLVIPSYQDQMASPLPQEISVNSTP 956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0117 956 Pfam Ethylene-responsive protein kinase Le-CTR1 148 346 - -
Acco06g0117 956 MobiDBLite consensus disorder prediction 376 445 - -
Acco06g0117 956 MobiDBLite consensus disorder prediction 64 82 - -
Acco06g0117 956 SMART serkin_6 675 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0117 956 ProSiteProfiles Protein kinase domain profile. 675 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0117 956 ProSitePatterns Protein kinases ATP-binding region signature. 681 703 IPR017441 GO:0005524
Acco06g0117 956 MobiDBLite consensus disorder prediction 404 444 - -
Acco06g0117 956 FunFam PAS domain-containing protein tyrosine kinase family protein 753 944 - -
Acco06g0117 956 MobiDBLite consensus disorder prediction 1 89 - -
Acco06g0117 956 Gene3D Transferase(Phosphotransferase) domain 1 754 936 - -
Acco06g0117 956 Pfam Protein tyrosine and serine/threonine kinase 676 925 IPR001245 GO:0004672|GO:0006468
Acco06g0117 956 FunFam Serine/threonine-protein kinase isoform 1 666 753 - -
Acco06g0117 956 ProSitePatterns Serine/Threonine protein kinases active-site signature. 794 806 IPR008271 GO:0004672|GO:0006468
Acco06g0117 956 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 81 931 - -
Acco06g0117 956 MobiDBLite consensus disorder prediction 541 563 - -
Acco06g0117 956 CDD STKc_MAP3K-like 681 927 - -
Acco06g0117 956 PRINTS Tyrosine kinase catalytic domain signature 788 806 IPR001245 GO:0004672|GO:0006468
Acco06g0117 956 PRINTS Tyrosine kinase catalytic domain signature 749 762 IPR001245 GO:0004672|GO:0006468
Acco06g0117 956 PRINTS Tyrosine kinase catalytic domain signature 835 845 IPR001245 GO:0004672|GO:0006468
Acco06g0117 956 PRINTS Tyrosine kinase catalytic domain signature 854 876 IPR001245 GO:0004672|GO:0006468
Acco06g0117 956 PRINTS Tyrosine kinase catalytic domain signature 898 920 IPR001245 GO:0004672|GO:0006468
Acco06g0117 956 MobiDBLite consensus disorder prediction 376 397 - -
Acco06g0117 956 Gene3D Phosphorylase Kinase; domain 1 668 752 - -
Acco06g0117 956 MobiDBLite consensus disorder prediction 27 63 - -
Acco06g0117 956 MobiDBLite consensus disorder prediction 1 25 - -
Acco06g0117 956 SUPERFAMILY Protein kinase-like (PK-like) 665 948 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0117 Acco-ChrAcco06 808274 815092 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0117 10 911 MAP Kinase Kinase Kinase AT1G08720 54.555 0.0 925
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Acco06g0117 PK_Tyr_Ser-Thr 1e-62 CL0016