Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0108 ATGAGCAAATTCCGGTTAAGAAAAAATAGAGATGAGCAAGCAACACTACGCTTTGGATTTTGTGACGATCTGACGTCTTGCTTTCGACTGTGCTCCCGCGCGTCTGTGCTCCGCTGCAATTCAAAGGTCAATATGGCGGATAAGGCGGTGACGGTGAGAACACGAAAGTTCATGACCAACCGTCTGTTATCAAGAAAACAATTTGTCATTGATGTACTTCATCCGGGGAGGTCAAATGTATCCAAGGCGGAGCTTAAGGAGAAGCTAGTAAGGATGTATGATGCCAAAGACCCTAATGCGATTTTTGTCTTCAAGTTTAGAACTCACTTTGGAGGCGGGAAATCAATTGGCTTTGGTTTAATTTATGATTCCGTTGAAAATGCAAAGAAGTTTGAGCCCAAGTATCGCCTTATCAGGAATGGACTCTCCACCAAGGTCGAGAAGTCAAGGAAACAGCTTAAAGAGCGCAAGAATCGTGCCAAGAAAATCCGTGGAGTAAAGAAGACTAAGGCATCTGAAGCTGCCAAGAAGAAATGA 537 0.4395 MSKFRLRKNRDEQATLRFGFCDDLTSCFRLCSRASVLRCNSKVNMADKAVTVRTRKFMTNRLLSRKQFVIDVLHPGRSNVSKAELKEKLVRMYDAKDPNAIFVFKFRTHFGGGKSIGFGLIYDSVENAKKFEPKYRLIRNGLSTKVEKSRKQLKERKNRAKKIRGVKKTKASEAAKKK 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0108 178 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 50 152 IPR012678 GO:0003735|GO:0005840|GO:0006412
Acco06g0108 178 PANTHER 40S RIBOSOMAL PROTEIN S24 45 175 IPR001976 GO:0003735|GO:0005840|GO:0006412
Acco06g0108 178 FunFam 40S ribosomal protein S24 45 178 - -
Acco06g0108 178 ProSitePatterns Ribosomal protein S24e signature. 110 132 IPR018098 -
Acco06g0108 178 Gene3D - 42 177 - -
Acco06g0108 178 MobiDBLite consensus disorder prediction 146 178 - -
Acco06g0108 178 Hamap 30S ribosomal protein S24e [rps24e]. 48 150 IPR001976 GO:0003735|GO:0005840|GO:0006412
Acco06g0108 178 MobiDBLite consensus disorder prediction 154 178 - -
Acco06g0108 178 Pfam Ribosomal protein S24e 69 147 IPR001976 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0108 Acco-ChrAcco06 737004 739352 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0108 45 177 Cytoplasmic Ribosomal Protein Gene Family AT5G28060 85.714 5.62e-82 237