Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0105 ATGAATGGTGTCGCACACCTCGAACCAGATTGCTCCGAATTTGTCGAAGTTGATCCCACTGGCAGATATGGCAGATACGATGAAGTTCTCGGCAAGGGAGCTTCAAAGACAGTATATAGAGCATTCGACGAGTATCAAGGAATTGAAGTTGCCTGGAACCAAGTCAAGCTTTATGATTTCTTGCAAAGCCCTGAAGATCTTGAGAGGCTCTACTGTGAAATTCATCTACTGAAAACATTGAAGCACAAAAACATCATGAAATTTTATACATCTTGGGTCGATACTGCTAATAGGAATATCAATTTCGTGACTGAGATGTTCACTTCTGGTACTCTTAGACAGTATAGGCTAAAGCACAAAAGAGTAAACATCAGAGCGGTGAAGCATTGGTGTAGACAGATTCTGAGAGGACTTCTTTATCTCCATAGCCATGATCCACCTGTGATTCATAGAGATCTCAAATGTGATAATATTTTTGTCAATGGACACCAAGGCGAAGTGAAGATTGGTGATCTTGGTCTAGCAGCAATTCTCCGAAAATCTCACGCTGCACATTGTGTCGGAACGCCTGAGTTCATGGCCCCAGAAGTCTATGAAGAAGCATATAATGAATTAGTTGATATATATTCCTTTGGCATGTGCTTACTTGAAATGGTTACATTTGAATATCCTTATAGTGAATGTACTCATCCAGCGCAAATCTACAAGAAAGTCATTTCTGGTAAAAAGCCAGATGCTTTATATAAAGTCAAGGATCCAGAAGTGAGACAGTTTGTTGAGAAATGCTTAGCAACCGTGTCTCTGAGGCTCTCAGCAAGAGAGCTTCTAGAGGACCCTTTCCTCCAAATTGATGATTACGAATCATTATTAAGGCCAGCTGACAGCAGTGAATCTGATGACATGGTTCCTCTCATCCGCCACCCATTATATGGTTTTGATCAAAGTTATAGTAATATCAGTACTGAATACTCTAACGGATTTGGCTATGATGGAGACTGGTATCCTAATCCGACTGAGATTGAATTCACTGGAATTGAACTCTTTCAATACCATAATGATGAACCCTCTGAAGATGTTGATATAAGCATCAAAGGCAAGAGGAAAGATGATGGGGGCATCTTTTTGAGACTAAGAATTGCAGATAAAGAAGGGCATATTCGAAATATTTATTTCCCATTTGACATTGAGACCGACACAGCATTAAGTGTGGCAACTGAAATGGTTGCAGAACTTGACATGACTGACCAGGATGTAACCAGAATAGCAGATATGATAGATGGGGAAATTGCTTCCTTGGTACCTGAATGGAGGCCAGGGCCAGGAATTGAGGACACTCCCCGCTCACCAATTCAAAGTTTCTGCCACAACTGCACATCTAATCATACTTCCAGTGGTTCCCTTACGGATTTTCTGTCACATGATTCCGGCACCAATAACGTGCAATTTCTTCAGTGCTGTAGGCATAAATGTGCTTCAATGCATGGACGGTTTGAGGAGATTACATTTGACTCTGACGAGTATGACAATCATCATGTTAGAGAGAATGCTGATGCACCTAATATATCCAGTCAATCAGACTGCCTGCAGTATCGGGAATTATGGAATCAGCATGAAAGTCGTGAACTTAGTCCAGTGGAATCTGAAAGAAGCCACTCTGATGAACAAATTGAACCATTGGATAAATCAGTATCAGCTGAAAATGAGGGATACTATGCTTGGGATTTCAAGTTCGCACACAATGTAGGAAATTCCCAGCGGAACTTGTCAGGAAAGCATTATTTTACCCCAATGAGTTCGTTTTATTGTGATCTTGAGGAAGAATGCGAGAAAGAGACCCAGCAGGAGCTAAGATGGCTCAAAGCAAAGTACCAAATGGAGTTACGGGAACTCAGGGATCGACAGCTTGGGCAAACAGTAAAATCTCCGCATGACAGTAAGCACAAATCAGTAAAACCTTCACAAACAGACACTTTTGAAAAAGGAAACAGTTTGAAACCCTTTGCTAATCGTGGTTCCAGTGGCCACTCTCACTTCAAAATGAGCAGCCCCAATTCGGACACCCAAAGGGCCCGAAATTGTGAGGCGATGGATTCCCCTAAAGGTGAGCTTGCTGCCAAGAGTATTTGCACAGGTTCATTGCTTCCCCACTCCCTACATAGAACTGTTTCCCTCCCAGTTGATGCGGTTGATATGTAA 2196 0.4194 MNGVAHLEPDCSEFVEVDPTGRYGRYDEVLGKGASKTVYRAFDEYQGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKHWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGHQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEEAYNELVDIYSFGMCLLEMVTFEYPYSECTHPAQIYKKVISGKKPDALYKVKDPEVRQFVEKCLATVSLRLSARELLEDPFLQIDDYESLLRPADSSESDDMVPLIRHPLYGFDQSYSNISTEYSNGFGYDGDWYPNPTEIEFTGIELFQYHNDEPSEDVDISIKGKRKDDGGIFLRLRIADKEGHIRNIYFPFDIETDTALSVATEMVAELDMTDQDVTRIADMIDGEIASLVPEWRPGPGIEDTPRSPIQSFCHNCTSNHTSSGSLTDFLSHDSGTNNVQFLQCCRHKCASMHGRFEEITFDSDEYDNHHVRENADAPNISSQSDCLQYRELWNQHESRELSPVESERSHSDEQIEPLDKSVSAENEGYYAWDFKFAHNVGNSQRNLSGKHYFTPMSSFYCDLEEECEKETQQELRWLKAKYQMELRELRDRQLGQTVKSPHDSKHKSVKPSQTDTFEKGNSLKPFANRGSSGHSHFKMSSPNSDTQRARNCEAMDSPKGELAAKSICTGSLLPHSLHRTVSLPVDAVDM 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0105 731 SUPERFAMILY Protein kinase-like (PK-like) 26 282 IPR011009 -
Acco06g0105 731 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Acco06g0105 731 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0105 731 MobiDBLite consensus disorder prediction 637 698 - -
Acco06g0105 731 SMART serkin_6 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0105 731 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 11 651 - -
Acco06g0105 731 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 374 427 IPR024678 GO:0004674|GO:0005524
Acco06g0105 731 Coils Coil 613 633 - -
Acco06g0105 731 MobiDBLite consensus disorder prediction 539 561 - -
Acco06g0105 731 Gene3D Transferase(Phosphotransferase) domain 1 107 286 - -
Acco06g0105 731 CDD STKc_WNK 22 281 - -
Acco06g0105 731 Gene3D - 371 436 - -
Acco06g0105 731 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0105 731 MobiDBLite consensus disorder prediction 655 692 - -
Acco06g0105 731 FunFam probable serine/threonine-protein kinase WNK9 371 455 - -
Acco06g0105 731 MobiDBLite consensus disorder prediction 637 654 - -
Acco06g0105 731 Gene3D Phosphorylase Kinase; domain 1 9 105 - -
Acco06g0105 731 FunFam Probable serine/threonine-protein kinase WNK1 9 105 - -
Acco06g0105 731 FunFam probable serine/threonine-protein kinase WNK9 107 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0105 Acco-ChrAcco06 726902 729961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0105 1 500 MAP Kinase Kinase Kinase AT3G22420 58.011 0.0 603
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Acco06g0105 Pkinase 3.1e-49 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g0105 06 726902 729961 Acco06g0105 06 726902 729961 CCT
Acco06g0105 06 726902 729961 Acco06g0105 06 726902 729961 ECH