Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0094 ATGTTCGATAGAGTGCCAGAACAGTTCCACCAATTCATAGCCCCAAGAACCTCACTTCCTCTTCACCCATCCCTCCCTCCCTTCGATGCTTACAACCCTTCTCATCATCACTTGCCCCTCCCGCCGCTGCCGCCGCTTCGGCAGCCGAATCTCCTGTCCCCATTGCACCTCAAAGACGAACAACACGAGCAGCAGCAAACTAGCATGAACTTCGAGATTAATGAAAGAGAACCACGATTGGGCGAGCATGAGCTGATTGATTCCACCAGCTGGACCGACGATGAGGTGCTTGCTCTTTTGAGGATCAGATCTGACCTCGACTCTTGGTTCCCTGAACTCACTTGGGAACATGTTTCAAGGAAGCTTGCAGAGCTTGGATTTAAAAGGTGTGCAGAGAAGTGCAAGGAGAAGTTCGAAGAAGAAACCAGTTACTTGAACAACATTCATTACACCAAGAACAACGGTTACCGCTTTATTAGCGAGCTCGAACAGCTTTACCAACAACAAGAAGCACATCAAATCGCTGGGGAGGAGATGGAGGTTGAGGTTGGGTCTCAAGAGAGTAAGCAGCTGCCGGAAAAGCCGGCTGAGGAACAACAAGGGAAGATGGATCACGCATTAGAAGATGGCTCAGCAAATGACGACGACGACGCATCATTGACCAAAAAATGTGAGGAAACTGTGAAGATGGCGGGGACGTCGTCAAAGCGCAAGAAACGAAAGAGGAACGATAAGTTTGAGATTTTGAAGGGTTTTTGCGAGAACATGGTGAACAAAATGATGGCAAAGCAAGAACAGATGCACAATAAGTTGCTGGAGGACATGATTAAAAGAGACCAAGAGATATTCGCGAGACAGGAGGCTTGGAAGAAACAGGAGATGGATGGCATGAACTGGGAGCTCGAAATGATGGCGAAAGAGCAGGCTGTTGCGGGCCAAAGGCAAGCCGCCATTGTTGATTTGTTGAAGAAAATTTCAGACCAGAGCCAGTATTATTGTACCAAAAGGGTATCAGACGATCCCATCAATCCAAATTCTCTGCAAGCTGCTTCCCCATCGAACTCACAAAACCCTAATCCATGTTGTAATTATACCGGGGAGAACAATCCCGAGCCGCCGTCACGCGTGGTCCTTAATTATACAAGCGAAGGCACATCGGATAAAAAACCTGATAGTTCAAGCGAAGTTCCTAATCCCTCTCCAAATGATTGCAATCCAGCCGCAGCAGTTACCCGTAACCCTAATTCTGTGAGTGCACAGTCAGATGGAGGGCCCGGAAAAACAGGTACGACGCAGAAAGGCGGGTCAGAGAAGTGTATGAGGAGAGAGAAAGAAGAGGTGGGAAGAAGATGGCCAAGAGAGGAAGTGGTGGCACTGATAAACCTGAGAAGCAGTGCGAACGAAGAGAGAGAAGGAGGAGGGAGCAGCAGCAGGGTTCCTCTGTGGGAGAAAATATCGGAAGGGATGAGGGAAATGGGGTACAACAGGAGCGCCAAGAGGTGCAAAGAGAAATGGGAGAACATAAACAAGTACTTCAGGAAGACAAAGCATCTGAGTAAGAAAAGGTCCCTGGAGTCTAGAACCTGCCCATACTTCCATCAACTCACTTCTTTGTATTCTCAATGA 1626 0.4822 MFDRVPEQFHQFIAPRTSLPLHPSLPPFDAYNPSHHHLPLPPLPPLRQPNLLSPLHLKDEQHEQQQTSMNFEINEREPRLGEHELIDSTSWTDDEVLALLRIRSDLDSWFPELTWEHVSRKLAELGFKRCAEKCKEKFEEETSYLNNIHYTKNNGYRFISELEQLYQQQEAHQIAGEEMEVEVGSQESKQLPEKPAEEQQGKMDHALEDGSANDDDDASLTKKCEETVKMAGTSSKRKKRKRNDKFEILKGFCENMVNKMMAKQEQMHNKLLEDMIKRDQEIFARQEAWKKQEMDGMNWELEMMAKEQAVAGQRQAAIVDLLKKISDQSQYYCTKRVSDDPINPNSLQAASPSNSQNPNPCCNYTGENNPEPPSRVVLNYTSEGTSDKKPDSSSEVPNPSPNDCNPAAAVTRNPNSVSAQSDGGPGKTGTTQKGGSEKCMRREKEEVGRRWPREEVVALINLRSSANEEREGGGSSSRVPLWEKISEGMREMGYNRSAKRCKEKWENINKYFRKTKHLSKKRSLESRTCPYFHQLTSLYSQ 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0094 541 SMART sant 87 144 IPR001005 -
Acco06g0094 541 SMART sant 447 511 IPR001005 -
Acco06g0094 541 ProSiteProfiles Myb-like domain profile. 450 509 IPR001005 -
Acco06g0094 541 FunFam Trihelix transcription factor GT-2 451 514 - -
Acco06g0094 541 Gene3D - 91 145 - -
Acco06g0094 541 Gene3D - 451 514 - -
Acco06g0094 541 PANTHER FI21293P1 62 540 - -
Acco06g0094 541 MobiDBLite consensus disorder prediction 215 233 - -
Acco06g0094 541 Pfam Myb/SANT-like DNA-binding domain 449 537 IPR044822 -
Acco06g0094 541 Pfam Myb/SANT-like DNA-binding domain 89 150 IPR044822 -
Acco06g0094 541 MobiDBLite consensus disorder prediction 191 209 - -
Acco06g0094 541 FunFam Trihelix transcription factor GT-2 91 147 - -
Acco06g0094 541 MobiDBLite consensus disorder prediction 336 435 - -
Acco06g0094 541 ProSiteProfiles Myb-like domain profile. 83 142 IPR001005 -
Acco06g0094 541 CDD GT1 449 516 - -
Acco06g0094 541 MobiDBLite consensus disorder prediction 177 241 - -
Acco06g0094 541 MobiDBLite consensus disorder prediction 336 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0094 Acco-ChrAcco06 656753 658824 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0094 1 541 Trihelix Transcription Factor Family AT5G28300 32.184 2.25e-78 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Acco06g0094 Myb_DNA-bind_4 3.2e-19 CL0123