Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0065 ATGGCTCGTATGGCATTTTCCCTGTCGTCCATACAGAATTTCACTTCCGATTCTGTATGGTCTTCGAGTCAAATGGAGCAGGTTTTGTTTACCCCTTCTCTCTTTCAACTAGATATCTTCACTCGTCTGTGGTTTGTTGATCTTTTGATAGCAAATAGTACGTGGTTTGATCCAGTTGCGTCAGTTGGAACTTCCATAGCCATGCTTTCATCTTTTTATGTTCTTCATATTCATCTGAAGACAAGCTTTCAAGATTCTCCCATCATTTCTCAGAAATCAACTGACAACGGGTCCTTCCCATCTACCCATTCAGAAATGCATTCTACAACATTCATTCCTCATTCCCAGGGAAATGATGAAATTTCCTGGGGACCAGATCCGCTTCAGGATATTCTTGATTTTCCTGAAATTGCCTCTGTCCAGAACGATCAGTTGGAAAATAGTTCTTGTTACATACCTGATGACAATACTAAGAAAACCGATCTTGTGGAATGGGTTGATCAGTTGATGTCAGTTGATGATTCTCTACACCCAAATTGGAGTCAGCTTCTTGGTGATGATGATGTAGCAGATTCAAAATCAAAGGAGTCCCAGGTTTCCCAGCAGCAGCATTTACCATCTGAAGAAGTTAATGCCCTTAATAATTCAGTGTCAACTGCACCACAAACTAAGCCAAGAATGCATTGGACTCCGGAACTTCATGAGTCATTTGTCGAAGCAGTTGATCAGCTTGGTGGCAGTGAGAAGGCTACTCCTAAGGGTGTCTTGAACCTGATGAAAGTCAAGGGCCTTACCATCTATCATGTGAAAAGCCACCTACAGAAGTATAGAACTGCCAGATACAAACCTGAGTCATCCGAAGGAACTTCTGAGAAGAAGAGTATGGGGATCACTGAAGCTCTGCGGTTGCAAATGGAATTACAAAAACGACTTCACGAGCAACTTGAGATTCAGATTGAGAACCAAGGCAAGCGTCTTCAGATGATGTTTGAGAGTCAAAGAGAAATGGAGGAGGGCAAGCTCAAGGGGTCCTCCTCCTTGGATGACCCTTCTGCCCCCTTATCAAACAAGGTTGAAAATTCAGAAATGTCAAATGAGGAACATGACAAATCAGGAACTGAAGGAAGTTCCCTGGGTGGAAGCACAAAGCAAGAAGATGACGACAAGTTTCCATGTGGTTATGATTATTCGGTTACCCCTTTAGCTTACAGTAGACGGAGAAATCGCCCGATGAAAGAGAGCCGGCGAGTTTGCATCGTGCAAGTTTAG 1269 0.431 MARMAFSLSSIQNFTSDSVWSSSQMEQVLFTPSLFQLDIFTRLWFVDLLIANSTWFDPVASVGTSIAMLSSFYVLHIHLKTSFQDSPIISQKSTDNGSFPSTHSEMHSTTFIPHSQGNDEISWGPDPLQDILDFPEIASVQNDQLENSSCYIPDDNTKKTDLVEWVDQLMSVDDSLHPNWSQLLGDDDVADSKSKESQVSQQQHLPSEEVNALNNSVSTAPQTKPRMHWTPELHESFVEAVDQLGGSEKATPKGVLNLMKVKGLTIYHVKSHLQKYRTARYKPESSEGTSEKKSMGITEALRLQMELQKRLHEQLEIQIENQGKRLQMMFESQREMEEGKLKGSSSLDDPSAPLSNKVENSEMSNEEHDKSGTEGSSLGGSTKQEDDDKFPCGYDYSVTPLAYSRRRNRPMKESRRVCIVQV 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0065 422 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 197 374 IPR044848 GO:0003700
Acco06g0065 422 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 222 281 IPR017930 -
Acco06g0065 422 Pfam Myb-like DNA-binding domain 226 277 IPR001005 -
Acco06g0065 422 Pfam MYB-CC type transfactor, LHEQLE motif 295 335 IPR025756 -
Acco06g0065 422 MobiDBLite consensus disorder prediction 195 224 - -
Acco06g0065 422 FunFam Myb family transcription factor 223 281 - -
Acco06g0065 422 Gene3D - 223 282 - -
Acco06g0065 422 MobiDBLite consensus disorder prediction 334 395 - -
Acco06g0065 422 SUPERFAMILY Homeodomain-like 222 278 IPR009057 -
Acco06g0065 422 NCBIfam myb-like DNA-binding domain, SHAQKYF class 224 278 IPR006447 GO:0003677
Acco06g0065 422 MobiDBLite consensus disorder prediction 184 224 - -
Acco06g0065 422 Coils Coil 298 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0065 Acco-ChrAcco06 472878 477884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0065 58 373 G2-like Transcription Factor Family AT3G04450 41.067 7.02e-66 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Acco06g0065 Myb_DNA-binding 1.4e-07 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g0065 06 472878 477884 Acco06g0658 06 4253663 4257346 CCT
Acco06g0065 06 472878 477884 Acco06g0065 06 472878 477884 ECH