Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0061 ATGAGGATTATGATAAAGGGTGGTGTTTGGAAAAACACGGAGGATGAAATCCTCAAAGCGGCTGTCATGAAATATGGTAAGAACCAGTGGGCTCGAATCTCTTCGCTTCTGGTTCGCAAATCCGCCAAGCAATGCAAGGCTCGATGGTACGAGTGGCTTGATCCTTCCATTAAAAAGACTGAATGGACAAGAGAAGAGGATGAAAAGCTTCTTCATCTTGCTAAGCTTATGCCCACACAATGGAGAACAATTGCTCCAATTGTAGGCCGTACCCCTTCCCAATGCCTTGAACGGTATGAGAAACTCCTTGATGCAGCCTGTGTAAAGGATGAGAACTATGAACCTGGTGATGACCCACGGAAACTGCGACCTGGTGAGATTGACCCAAACCCTGAGTCAAAGCCTGCACGACCAGATCCCGTTGATATGGATGAGGATGAGAAGGAGATGTTGTCTGAAGCACGAGCTAGGTTAGCCAACACCAAGGGTAAGAAGGCAAAACGGAAAGCTAGGGAGAAACAACTAGAAGAAGCCAGGAGGCTTGCCTCTTTACAAAAAAAGAGAGAACTGAAGGCTGCTGGAATTGATATCAGGCAGCGGAGGAGGAAAAGGAAAGGAATAGACTACAATGCAGAAATCCCATTTGAGAAAAGGCCTCCTCCAGGGTTTTTTGATGTTACTGATGAAGATAGACAAGTGGAACAGCCCAAGTTCCCTACCACAATTGAAGAACTTGAGGGAAAAAGAAGGATTGATGTGGAAGCACAGTTAAGAAAGCATGACATTGCAAAGGATAAGATTGCACAAAGGCAAGATGCCCCCTCTGCTATACTACACGCCAATAAGCTCAATGACCCAGAAACAGTTAGAAAAAGGTCAAAATTGATGCTTCCACCACCCCAAATTTCTGATCATGAATTAGAAGAAATTGCAAAGATGGGTTATGCTAGCGACCTTGTGGTGAGTGAGGAAATTGCTGAAGGTAGTGGTGCAACACGTGCTCTTCTGGCTAATTATGCGCAGAGCCCTAGCCAGGGAACGACTCCATTGCGAACTCCTCAGAGAACACCAGCTGGTAAGGGAGATGCTATCATGATGGAAGCTGAAAATCAGGCAAGGTTGAGGGAGTCTCAGACACCATTGTTGGGAGGAGATAACCCAGAGTTGCACCCTTCAGACTTTTCTGGGGTCACTCCCAAGAGAAAGGAAATACAGACTCCAAATCCTATGTTGACTCCCTCTGCAACGCCTGGAGGTGGAGGCCTCACCCCTAGAAGTGGTATGACACCAGCAAGGGATGGCTTTTCTTTTGGCATGACTCCTAAGGGAACTCCTCTAAGGGATGAGCTTCATATCAATGAAGACATGGATATGCATGAGAACACAAAACTTGAACAACGTAGACAAGCTGATCTCAAAAGAAGCTTGCGCTCTGGTTTAAGCAGTCTTCCACAGCCAAAAAATGAGTACCAGATAGTTATGCAACCAGCTCCAGAAGATGTTGAAGAATCTGAGGAAAAGATTGAAGAGGATATGTCTGACAGAATTGCTCGAGAAAAAGCTGAGGAAGAAGCTCAACAACAAGCATTACTTAGAAAACGATCAAAGGTCCTTCAAAGGGAGCTTCCTAGGCCTCCTGTTGCATCACTGGAACTGATAAGAAATTCTTTGATTATTTCTGATGGGGATAAGAGTTCCTTTGTTCCTCCTACTTTTATCGAGCAAGCTGATGAGATGATAAGAAAGGAGCTTCTAAGCTTACTGGAACACGACAATGCCAAGTACCCACTTGATGAGAAAGTTAATAAGGACAGGAAAAAAGGAGCCAAACGTGCTGCAAATGGGTCTGCTGTTGTCCCTCTGATTGAAGATTTTGAGGAAGATGAAATGAAAGATGCTGATCAGTTTATAAAGGAGGAGGCTCAGTATCTTCGTGTAGCTATGGGACATGAAAGTGAACCCTTCGATGAATTTGTTGAAGCGCATGGAACTTGCCTTAAAGATCTTATGTACTTCCCTGCCCGTAATGCCTATGGGCTCTCAAGTGTTGCCGGAAATATGGAGAAGCTTGCAGCTTTGCAGAATGAATTTGAGAATGTGAGAAAAAAATTGGATGATGGCAAGGAGAAAGTGGTACGCCTTGAGAAGAAGGTGATGGTCCTTACACAAGGCTATGAGATGAGGGGGAAGAAAAGTCTTTGGCCACAAATCGAAGCCACATTCAAGCAGATGGACACTGCTGCAACAGAACTAGAGTGCTTCCGAGTTTTGCAAAAGCAGGAGCAGCTAGCTGCATCACATCGGATAAACAATATATGGGCTGAAGTAGAGAAGCAAAAGGAACTTGAGAAAACCTTTCAAAAGAGATACGGGGATCTTCTGGCAGAGGTGGAAAGGATTCAAAACACTATGAACCAATACAGGGTGCATTCTAACCATGAAGAAGAAGTTGCTGCCAAGGAGCGTTCTCTTGAGTCTGCTGAGATTGCATCCGATGAAACGAGCATGCAGGGTATAGAGAATCATGAAAGTATATCCAACTCAGATGAGCATGGAAGTGTAGTGTTAGATAATTCTACGCATGATCAAACGCCGGTACAGCAAGTAGACCTGATACAAACCAAGGCCACATCAGGCCCCAAAAACGATGTTGATGTTGATGCTGATAAGGAGCGAATGACACGTGACACTGATGTCAAAGGACAAGATGCCACACCCGTTGCAGAGGAGGAGGGGGTCAGCGCAACAGTAGTACCAGGCAAGAGTATTGATAGCTGCATTGTCCACAGGGAGACCACTCGAGACACGGGAGCTCAAAAGGATACAAGAAGTATTGAGAGATGTGAGAATCCAGATAATGCGGCCATAGATTCACATGATGACAAAATACCAGAAACCGCTGATCTGGATTAG 2913 0.4504 MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACVKDENYEPGDDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTKGKKAKRKAREKQLEEARRLASLQKKRELKAAGIDIRQRRRKRKGIDYNAEIPFEKRPPPGFFDVTDEDRQVEQPKFPTTIEELEGKRRIDVEAQLRKHDIAKDKIAQRQDAPSAILHANKLNDPETVRKRSKLMLPPPQISDHELEEIAKMGYASDLVVSEEIAEGSGATRALLANYAQSPSQGTTPLRTPQRTPAGKGDAIMMEAENQARLRESQTPLLGGDNPELHPSDFSGVTPKRKEIQTPNPMLTPSATPGGGGLTPRSGMTPARDGFSFGMTPKGTPLRDELHINEDMDMHENTKLEQRRQADLKRSLRSGLSSLPQPKNEYQIVMQPAPEDVEESEEKIEEDMSDRIAREKAEEEAQQQALLRKRSKVLQRELPRPPVASLELIRNSLIISDGDKSSFVPPTFIEQADEMIRKELLSLLEHDNAKYPLDEKVNKDRKKGAKRAANGSAVVPLIEDFEEDEMKDADQFIKEEAQYLRVAMGHESEPFDEFVEAHGTCLKDLMYFPARNAYGLSSVAGNMEKLAALQNEFENVRKKLDDGKEKVVRLEKKVMVLTQGYEMRGKKSLWPQIEATFKQMDTAATELECFRVLQKQEQLAASHRINNIWAEVEKQKELEKTFQKRYGDLLAEVERIQNTMNQYRVHSNHEEEVAAKERSLESAEIASDETSMQGIENHESISNSDEHGSVVLDNSTHDQTPVQQVDLIQTKATSGPKNDVDVDADKERMTRDTDVKGQDATPVAEEEGVSATVVPGKSIDSCIVHRETTRDTGAQKDTRSIERCENPDNAAIDSHDDKIPETADLD 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0061 970 MobiDBLite consensus disorder prediction 894 915 - -
Acco06g0061 970 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 107 IPR017930 -
Acco06g0061 970 FunFam CDC5 cell division cycle 5-like 60 120 - -
Acco06g0061 970 MobiDBLite consensus disorder prediction 929 970 - -
Acco06g0061 970 MobiDBLite consensus disorder prediction 379 422 - -
Acco06g0061 970 Pfam pre-mRNA splicing factor component 406 654 IPR021786 -
Acco06g0061 970 Coils Coil 167 187 - -
Acco06g0061 970 SMART sant 58 105 IPR001005 -
Acco06g0061 970 SMART sant 6 55 IPR001005 -
Acco06g0061 970 Gene3D - 60 114 - -
Acco06g0061 970 MobiDBLite consensus disorder prediction 821 858 - -
Acco06g0061 970 ProSiteProfiles Myb-like domain profile. 2 53 IPR001005 -
Acco06g0061 970 SUPERFAMILY Homeodomain-like 33 106 IPR009057 -
Acco06g0061 970 ProSiteProfiles Myb-like domain profile. 54 103 IPR001005 -
Acco06g0061 970 MobiDBLite consensus disorder prediction 113 150 - -
Acco06g0061 970 Coils Coil 683 717 - -
Acco06g0061 970 CDD SANT_CDC5_II 55 106 IPR047240 -
Acco06g0061 970 FunFam CDC5 cell division cycle 5-like 5 59 - -
Acco06g0061 970 MobiDBLite consensus disorder prediction 399 413 - -
Acco06g0061 970 Gene3D - 5 59 - -
Acco06g0061 970 MobiDBLite consensus disorder prediction 157 176 - -
Acco06g0061 970 Coils Coil 810 830 - -
Acco06g0061 970 Pfam Myb-like DNA-binding domain 10 70 - -
Acco06g0061 970 CDD SANT 10 53 IPR001005 -
Acco06g0061 970 MobiDBLite consensus disorder prediction 829 858 - -
Acco06g0061 970 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 2 57 IPR017930 -
Acco06g0061 970 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 1 806 IPR047242 GO:0000398|GO:0000974
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0061 Acco-ChrAcco06 453419 457871 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0061 1 833 MYB-Related Transcription Factor Family AT1G09770 74.731 0.0 1226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco06g0061 Myb_Cef 5.2e-62 No_clan