LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco06g0055	ATGTGGAGAATCAAAACGTGGCAGGGTCGTACTCCCCTGTCCCCACCGAATATTCCACAGCATCACTCCCTCACTGGAGTTGAAGCCAAACCCTTTCTTCTATCTTCTCTCTCTATAAATCAATGCCTCCGCTCCCTCCCTCTCCCTAACCTTCACTTCAGAGTTCAAAGTTCAAACCCTATCATGTGTGAGCAACTCAAAGGTCAGTACCAGTTGTGCCAAGAGATCGGTCGTGGTCGGTTCGGCACCGTCTTCCGCTGCTTCAACCCTGTCTCTAACGACTTCTTCGCCTGCAAAGTCATCGACAAGCTCCTCCTCACCGATTCCATCGATCGCGAGTGCCTCCAGAATGAACCCAAGTATATGGCTCTCCTCTCCCCCCACCCTCATATTCTTCAGATTTTTGACGTCTTCGAGAACGACGATTGCCTCTCTGTCGTCCTTGAGCTCTGTGAGCCCCTCACCCTCCTCGACCGCATCTTCGATCGCCCCTTGCTGGAGACTGAGGCCGCTTTCATCATGAAGCAGCTCCTAGAGGCAGTCGCCCATTGCCATCGGCTAGGCATAGCCCACAGAGACATCAAACCCGACAATATTTTGTTCGATGCCCAGAATAATCTTAAGGTCGCCGATTTTGGGTCCGCTGAGCGTTTCGGCGACGGAGGGACCATGACCGGGGTGGTGGGGACGCCGCATTATGTGGCGCCGGAGGTGCTTTTGGGGAGACAGTACAACGAGAAAGTAGATGTATGGAGTAGCGGGGTGATATTGTACATAATGTTGTCTGGGGTTCCGCCCTTTTATGGAGAATCGGCCGAAGAGATCTTTGAGGCTGTGTTGAGGGCTAATCTGAGGTTTCCATCTAGGATTTTCAGGTCCGTGTCTTCCGCCGCGAAGGATCTAATGAGGAAGATGATGTGTAGGGATGCGTCCAGGCGATTATCCGCAGAGCAAGCCCTGAGGCACCCTTGGATCCTGAGTGGAGGAGAGGCCACCGATCTGACCTGA	1008	0.5317	MWRIKTWQGRTPLSPPNIPQHHSLTGVEAKPFLLSSLSINQCLRSLPLPNLHFRVQSSNPIMCEQLKGQYQLCQEIGRGRFGTVFRCFNPVSNDFFACKVIDKLLLTDSIDRECLQNEPKYMALLSPHPHILQIFDVFENDDCLSVVLELCEPLTLLDRIFDRPLLETEAAFIMKQLLEAVAHCHRLGIAHRDIKPDNILFDAQNNLKVADFGSAERFGDGGTMTGVVGTPHYVAPEVLLGRQYNEKVDVWSSGVILYIMLSGVPPFYGESAEEIFEAVLRANLRFPSRIFRSVSSAAKDLMRKMMCRDASRRLSAEQALRHPWILSGGEATDLT	335

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco06g0055	335	SMART	serkin_6	70	325	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Acco06g0055	335	Gene3D	Transferase(Phosphotransferase) domain 1	156	333	-	-
	Acco06g0055	335	CDD	STKc_CAMK	69	324	-	-
	Acco06g0055	335	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	189	201	IPR008271	GO:0004672\|GO:0006468
	Acco06g0055	335	SUPERFAMILY	Protein kinase-like (PK-like)	63	327	IPR011009	-
	Acco06g0055	335	PANTHER	SERINE/THREONINE-PROTEIN KINASE	64	329	-	-
	Acco06g0055	335	Gene3D	Phosphorylase Kinase; domain 1	49	152	-	-
	Acco06g0055	335	ProSitePatterns	Protein kinases ATP-binding region signature.	76	99	IPR017441	GO:0005524
	Acco06g0055	335	FunFam	Phosphoenolpyruvate carboxylase kinase 1	62	152	-	-
	Acco06g0055	335	ProSiteProfiles	Protein kinase domain profile.	70	325	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Acco06g0055	335	Pfam	Protein kinase domain	70	325	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Acco06g0055	335	FunFam	Phosphoenolpyruvate carboxylase kinase 2	62	335	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco06g0055	Acco-ChrAcco06	394372	395572	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco06g0055	64	333	EF-hand Containing Proteins	AT1G50700	40.146	3.67e-71	227

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CAMK_CDPK	Acco06g0055		Pkinase	1.1e-70	CL0016