Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0046 ATGGCTTCTCAGCTCTCTTGCTCCGCCGCTGACCTTGACCCACTTCTCACGGCCGCCACCAACGCAACGGCTGCTGCCACCTACCTCTGTACTCAATTCCAAACCATATCCGCAAAGCTGATCGACACCACCTACGCCGTCAACAACACCTACCTTCTCTTCTCAGCCTATCTGGTGTTCGCCATGCAACTTGGCTTCGCCATGCTGTGCGCCGGTTCTGTGCGGGCCAAGAACACCATGAACATAATGCTCACCAACGTCCTGGATGCCGCAGCCGGCGGCCTCTCTTACCATCTCTTTGGGTTTGCCTTTGCATTTGGGTCCCCCTCCAACGGCTTCATCGGTCGCCACTTGTTCGGCCTCCGACACTTCCCTTCCCCATCCGCAGACTACAGCTTCTTCCTCTATCAATGGGCTTTTGCCATAGCAGCCGCCGGAATCACCAGCGGCTCCATTGCCGAGAGAACCCAATTCGTGGCTTACCTCATTTATTCCTCTTTCCTCACAGGCTTCGTTTACCCCGTCGTTTCCCATTGGTTCTGGTCCCCTGACGGTTGGGCCAGCCCCACTCGGGCCCATGGCCTTTTATTTGGGTCCGGTGCTATTGACTTCGCCGGTTCGGGTGTGGTACACATGGTGGGTGGCATAGCAGGCTTGTGGGGTGCGTATTTGGAAGGGCCAAGAATTGGGCGATTCGACCGGACGGGCCGCTCTGTTGCCTTGCGGGGCCACAGCGCCTCCCTAGTTGTGTTGGGATCGTTCTTGTTATGGTTCGGGTGGTACGGCTTCAACCCGGGCTCGTTCCTCACCATCTTGAAGCCTTACGGAGGCGGTGGCAATTATTACGGTCAATGGAGTGCCGTAGGCAGGACAGCAGTGACCACCACATTGGCTGGCTGCACCGCGGCGCTGACCACCTTGTTCGGAAAACGCTTATTGGTGGGGCACTGGAACGTCATAGACGTGTGTAACGGGCTGCTCGGGGGATTTGCGGCCATAACGTCCGGCTGCTCGGTGGTAGAGCCGTGGGCAACGATCATATGCGGTTTCGTGGCGGCATGGGTGCTGATTGGGCTGAACAAGCTGGCGGTGAGGGTGGGGTACGACGACCCGCTGGAGGCGGCGCAGCTGCACGGAGGGTGCGGGGCGTGGGGGTTGCTGTTCACGGGATTGTTGGCGAAGAAGGAATACGTGGAGGAGGTATACGGAGGGGGGAGGAGGCACGGGCTGCTGATGGGAGGGGGAGGGAGGCTGGTGTCGGCGCAGGTGGTGGGGATAGTGGCGGTGTGGGGGTGGGTGACGGCGACGATGGGGCCTCTGTTCTACGTGCTGAAGAAGATGAAGCTGTTGAGGATATCGAGGGAGGAAGAGATGGCGGGAATGGACCTGACGAGGCATGGCGGCTTTGCATATGCTTACCACGATGAGGATGAAAGCGTGAGGCCTCCAGGCTTCATGGTGGGAAAGATCGAGCCTGCAAATTCCCTCGCCGCCACTCCCACCCCATAA 1509 0.5918 MASQLSCSAADLDPLLTAATNATAAATYLCTQFQTISAKLIDTTYAVNNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYHLFGFAFAFGSPSNGFIGRHLFGLRHFPSPSADYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSPDGWASPTRAHGLLFGSGAIDFAGSGVVHMVGGIAGLWGAYLEGPRIGRFDRTGRSVALRGHSASLVVLGSFLLWFGWYGFNPGSFLTILKPYGGGGNYYGQWSAVGRTAVTTTLAGCTAALTTLFGKRLLVGHWNVIDVCNGLLGGFAAITSGCSVVEPWATIICGFVAAWVLIGLNKLAVRVGYDDPLEAAQLHGGCGAWGLLFTGLLAKKEYVEEVYGGGRRHGLLMGGGGRLVSAQVVGIVAVWGWVTATMGPLFYVLKKMKLLRISREEEMAGMDLTRHGGFAYAYHDEDESVRPPGFMVGKIEPANSLAATPTP 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0046 502 SUPERFAMILY Ammonium transporter 45 452 - -
Acco06g0046 502 NCBIfam ammonium transporter 48 471 IPR001905 GO:0008519|GO:0016020|GO:0072488
Acco06g0046 502 FunFam Ammonium transporter 29 484 - -
Acco06g0046 502 Pfam Ammonium Transporter Family 51 471 IPR024041 GO:0008519|GO:0016020|GO:0072488
Acco06g0046 502 ProSitePatterns Ammonium transporters signature. 203 228 IPR018047 GO:0008519|GO:0016020|GO:0072488
Acco06g0046 502 Gene3D Ammonium transporter AmtB like domains 24 483 IPR029020 -
Acco06g0046 502 PANTHER AMMONIUM TRANSPORTER 19 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0046 Acco-ChrAcco06 339809 341317 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0046 27 502 Inorganic Solute Cotransporters AT1G64780 79.418 0.0 770