Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g3038 ATGAGTGCCAAGAACCCTAAAAACGTGTACCACATCGGAGGCCTCCAAGTGGAATTTCCTTACCAGCCATACGGTTCTCAGTTTGCATTTATGGGTAGAGTCGTATCTACCCTTAACCGGGCTCAGAGAGAAGGCCATTGTCACGCATTGCTTGAGTCTCCAACCGGTACTGGCAAGTCCCTTTCGCTTCTCTGCTCCTCCCTCGCTTGGCAGCAGAACTACAAGTTAAATAAACAGCACAAAAATCTCTCTTACCTGAAGCCCGCTCCAGAAGCAACGACAGACCCTCTTGTTTACGGTGGTGGATTTGTTCCCGATGAGGTTTCTCCGACATCAGAAAATATGGAGCTGCCAGAGACTGAGGCTAACAACAAGATGCAGAAGAAAAAGGCTGCACCAACCATATATTATGCTTCGAGGACACACTCACAAATTTCTCAAGTAATTCGTGAATTGCGGAAAACATCTTATCGGGTGCCTATGGCTGTGTTGGCGTCACGGAAACATTACTGTACCAATAAACATATACTGGCCAAAGACAATATTGATGAAGAATGTAAACTACTTTTGAAAGATCAGGAAACAGGATGCCCAGAATTCAAAAATGCACATAAAGTCAAAAGTCACCCATCCCTACAAAGAGGAGGATGCAACGAGGTGCATGATATAGAAGATCTTGTGAAAGTTGGACAGGGAGTGAAAGGTTGCTCCTATTATGCAGCTCGCTCTATGTCAGATGATGCCCAATTGGTATTTTGTCCTTATAGTTATATTATCAATCCGGTCATTCGAGGAGCAATGGATGTAGATATAAAAGGAGCCATTGTGATTCTGGATGAAGCCCACAATATAGAGGATATCACTCGTGATGCTGGTAGTATTGATATTGAAGAGGATGTTTTGGATAAGCTGCAAATGGAGCTTCAACAACTGTGTCCTGTCAATCCTCTGGTATACCAACCTTTATATGAAACGGTGCAGGGTCTTACAAGCTGGATAGAACGTAGGAAAAATAAACTAGAAAAGCGTGATTTTCAGCACTATGTGTCTTGTTGGACTGGGTCAAATGCTTTATCAGAACTCCAAGAAGCAAATATTTCACTTCAGTGCTTCCCTATCCTGCTAGAATGTGCTACCAAGGCAATCAAATTTGCTTCAGATTTGGAGTCAGATGTACCCCATTTAAGTGGCATGTCAGTGTTAACATTGGAAGGCTTATTCTCTTCACTAACTTATTTCTTCTCAAGAAATGGTTCTCATATGCTGGATTTCCAGCTTGCTCTTCAGCGGGGTGTTAAGAAAGAAGCTGGAAGATCTTTTGGAAATTGGATCCACACTTTGAGTTTATGGTGCTTGAATCCAGCAGTTGTGTTTAGTGACATTGCCAGTCTTTCTTTATCAGTCATTTTGACTTCTGGGACATTGTCACCAATGAATTCCTTTTCATCTGAGCTTGGAGTTCAGTTTGAAACTAGTCTGGAAGCTCCGCATGTAATTAATGTTGACTCTCAGGTATGGCCTGCTATAATTTGTACCGGTCCAGGTAATTATCCTTTGAATGCAAGTTATAAAACAGCAGATGGATATGCATTCCAGGATGCAGTTGGAAGATCTTTAGAGGAAATTTTCAAAATTGTTCCTGGTGGCTGTCTTGTTTTCTTTCCAAGTTATAAATTAATGGAGAAATTATGCAATCGATGGTCTGAAACAGGTCAATGGTCTCGTCTAAATGCAGAGAAATCACTTTTTGTCGAACCTAGAGGAGGAAGCCAAGATGATTTTGAGCTTGCTTTAAAAGGGTATTATGACTCAATTCATCTTCACGCTACACCTACATTGGGCAGGAAAAGAAGGGTTAAGAATGTTGGCTTTAGTCATTTACATGCAGTCAATTCTCCAAAAAATTCTGAGAAAGGAGGAGGAGCTTTGCTTGGCGTTTGTCGAGGAAAGGTTTCTGAGGGCATTGATTTTTCTGACGATTATGCTAGAGTGGTTATTATAGTCGGCATTCCATTTCCCAACATAAATGATATTCAAGTTGCACTAAAGAAGAAATACAACGACACATACAAATCATCCAAGAATCTTTTGGGTGGAAATGAGTGGTATTGCCATCAAGCATTTCGAGCTTTGAATCAAGCAGCAGGTCGTTGCATACGGCATAGGCTTGATTATGGAGCAGTCATCTTATTGGATGAACGCTTTAAGGAAGAGAGAAATAGAGCATTTATTTCAAAGTGGTTAAGAAAATCCTTAAGGATATACGACAGCTTTGACTTGTCTTTGAAGGGACTAAGATCATTCTTTGAGAAAGCCAAGGAGCAGTTTGGCACAAATGTCACTCAAAATTTGGGTTTAAACCAGGAATGTGACCAAGCCAAGGATCAGAATATGGGATTTATAAGAAAGACAAATAAGAAACTGTCTGAGTCTGCTAATGGTGGTGATGGAAAAATAGAAATGATCAAGGATGAGAATCAGCCATCTGTGCAAAAGGATGGTGACTCATACAACTGTCAAGACTGTTTTGACCCAAGGGATTGCAAACAGGCAGTATCACGCTTCACTGGGGTATCATCTGCGGCAGTTATACATGAAGAAGTCTCCCTTGTGAAGAAGTCTCCCTTGGATGGCGGCACTGTCCCTGCTAGCCCTGGTTATGGCTGTAAGGATGACCACTCTAGCTCTACCTTAATCGAGGCACCTTCTGGATTAAATGATCAGTCAGTCCTTCCAATTTCTTCAAGTATTGGAAGTAAAGCTTCTTCAACATCTCAGTGTTTAATATCAGTTACTCCTGAAAAAACTGTAACTTCCAACAGCTGTCATACTGTGGAAACAGAATCATCTTTGGATAGGAGTGTTAATTCTCACACCCAGAAAAGGAGAAAGTCCATGGACATACCATTTATAAGCCTTATAGAGGAAGAGAATTACATCACCCCCTGTGCCCGCATCCCTTCAAGGCACACTGTAAGCTTGGTGAATGTCAACGAGGCAACAAATGGAAATAAATCTGAATTTCACAAAAAATTGAAGTCAAATTCACTTCGATCACAGACAAGCAATCTGTCTAGTTCATTTTTATTGACTGATCCTGTCAAGGAGAAAAAGTTGCAGATATTTTGCTCACTTTGCAAAAACCCATTGGGCCGGCCTGAGAATAATCTATATATTACATGTTCTATGACTTCATCATCAAAAGTTCACTTAAGATCTCTTTTGAAACAGAGACTGAAAGCTTACAATGATGATGATTTAAGAAGTGTACCAATTATTATAACTTGCATTTCATATGTTGATCAACGTATCTGTGACAGAGTTGATGGAAGTGTTCCAGAACAAGGTATTTGGTGCCCAGAAGATGGGTGTGTTTTCAGGTCTATGTTTTGCTGCTTCTGCAGTAAACCCAACAATTTGCTTGGGGTACAGACCATGGCAACTGATGCATCAAATAGTCATTTACTTGACAAGATGTTGTTTTACTTTGACTGTTTGGAAGTCAGGAATCTTGAGGAATCAAGGAGTGAAGCTTCAATGAAAGCAGATTTGCTGCCAAATAGAGACTCGGGCGTGGATGAAATTGCTGTCTTGAATTCTTTTGACAAATTTGATCTTCCACAGCTTGAGAAGTCAAGAATCTTGAAGACTAGAGAATCAAAGGTCAGATGTCAAGTAATTTTTATGCATTTAAGTTCATGGGCACTCTTTCGTGCCAAAATTGACACATTTTTAACGTGCAGCAGAATTGCCAAGGAGGCTTCCAATGCTGAAAGCCAAAGTTGA 3786 0.406 MSAKNPKNVYHIGGLQVEFPYQPYGSQFAFMGRVVSTLNRAQREGHCHALLESPTGTGKSLSLLCSSLAWQQNYKLNKQHKNLSYLKPAPEATTDPLVYGGGFVPDEVSPTSENMELPETEANNKMQKKKAAPTIYYASRTHSQISQVIRELRKTSYRVPMAVLASRKHYCTNKHILAKDNIDEECKLLLKDQETGCPEFKNAHKVKSHPSLQRGGCNEVHDIEDLVKVGQGVKGCSYYAARSMSDDAQLVFCPYSYIINPVIRGAMDVDIKGAIVILDEAHNIEDITRDAGSIDIEEDVLDKLQMELQQLCPVNPLVYQPLYETVQGLTSWIERRKNKLEKRDFQHYVSCWTGSNALSELQEANISLQCFPILLECATKAIKFASDLESDVPHLSGMSVLTLEGLFSSLTYFFSRNGSHMLDFQLALQRGVKKEAGRSFGNWIHTLSLWCLNPAVVFSDIASLSLSVILTSGTLSPMNSFSSELGVQFETSLEAPHVINVDSQVWPAIICTGPGNYPLNASYKTADGYAFQDAVGRSLEEIFKIVPGGCLVFFPSYKLMEKLCNRWSETGQWSRLNAEKSLFVEPRGGSQDDFELALKGYYDSIHLHATPTLGRKRRVKNVGFSHLHAVNSPKNSEKGGGALLGVCRGKVSEGIDFSDDYARVVIIVGIPFPNINDIQVALKKKYNDTYKSSKNLLGGNEWYCHQAFRALNQAAGRCIRHRLDYGAVILLDERFKEERNRAFISKWLRKSLRIYDSFDLSLKGLRSFFEKAKEQFGTNVTQNLGLNQECDQAKDQNMGFIRKTNKKLSESANGGDGKIEMIKDENQPSVQKDGDSYNCQDCFDPRDCKQAVSRFTGVSSAAVIHEEVSLVKKSPLDGGTVPASPGYGCKDDHSSSTLIEAPSGLNDQSVLPISSSIGSKASSTSQCLISVTPEKTVTSNSCHTVETESSLDRSVNSHTQKRRKSMDIPFISLIEEENYITPCARIPSRHTVSLVNVNEATNGNKSEFHKKLKSNSLRSQTSNLSSSFLLTDPVKEKKLQIFCSLCKNPLGRPENNLYITCSMTSSSKVHLRSLLKQRLKAYNDDDLRSVPIIITCISYVDQRICDRVDGSVPEQGIWCPEDGCVFRSMFCCFCSKPNNLLGVQTMATDASNSHLLDKMLFYFDCLEVRNLEESRSEASMKADLLPNRDSGVDEIAVLNSFDKFDLPQLEKSRILKTRESKVRCQVIFMHLSSWALFRAKIDTFLTCSRIAKEASNAESQS 1261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g3038 1261 Gene3D - 23 320 IPR027417 -
Acco05g3038 1261 SMART Cxpdneu3 557 737 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Acco05g3038 1261 SMART deadxpd 15 343 IPR006554 GO:0003678|GO:0016818
Acco05g3038 1261 Gene3D - 516 761 IPR027417 -
Acco05g3038 1261 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-2 domain profile. 13 352 IPR014013 GO:0005524
Acco05g3038 1261 CDD SF2_C_XPD 503 735 - -
Acco05g3038 1261 FunFam Fanconi anemia group J protein-like isoform E 123 333 - -
Acco05g3038 1261 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 43 731 IPR027417 -
Acco05g3038 1261 Pfam Helicase C-terminal domain 539 750 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Acco05g3038 1261 Pfam DEAD_2 137 300 IPR010614 GO:0003677|GO:0003678|GO:0005524
Acco05g3038 1261 FunFam Fanconi anemia group J protein homolog 516 763 - -
Acco05g3038 1261 PANTHER DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER 12 771 IPR045028 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g3038 Acco-ChrAcco05 44840600 44855140 Dispersed