Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g3035 ATGAGCTGCTTCTCTTGCATTAGTCGTGGTCGCTCAGATGCAAGCAGAATCCAAATTGATAATGCTCCTCGATCTACATCTTCTTCGGGGACTGGGCGGACCAAGTCCCATGCCCGCGACGATGGAAGCAAGGGAGGATCCTCGGATGGGAAGGGGAAGAATGGCGTCGCCGGCAGCCCAAAAAGCAGTGCAGCCCGTAGTTTCACTTTTCGTGAACTTGCAGCTGCAACGAGGGGTTTCAAGCCCGTGAATTTGATCGGGGAAGGAGGCTTTGGGAGGGTTTACAAAGGTCGTCTTGATACAGGCCAGCTTGTTGCCGTCAAACAATTAAATCACGATGGTCATCAAGGTTTTCAGGAATTCATAGTAGAGGTTCTCATGTTAAGCCTGCTACACCATTCTAATCTTGTCACCTTGTTTGGTTACTGCACCGACGGAGATCAAAGGCTTTTGGTTTATGAATATATGCCTATGGGTAGCGTGGAAGATCATCTTTTTGATCTGAAACCAAACCAAGAGCTGTTAAGTTGGAACGATCGGATGAAGATTGCTGTTGGAGCTGCACGAGGGCTTGAGTACCTTCATTGTAAAGCAAATCCACCTGTTATCTATCGGGACTTGAAATCTGCAAACATACTATTAGACAATGACTTCAACCCAAAACTCTCAGATTTTGGGCTTGCTAAGCTTGGTCCTGTTGGAGACAATACACATGTTTCAACCAGAGTGATGGGAACATATGGCTACTGTGCCCCAGAGTATGCCATGAGTGGCAAATTGACTCTTAAATCTGATATCTACAGCTTTGGTGTGGTATTGATGGAGTTGATTACTGGACGAAGGGCAATAGATGTCAGTAAGAAACCAGGGGAGCAAAACTTAGTTGCATGGTCTCGACAGTTTCTAAAGGATCGGAGGAAGTTTGTACAGTTGGTTGATCCTCATCTTGAAGGACAGTTCCCCTTGCGCTGTTTGCATCATGCCATTGCTATCACTGCAATGTGTCTCCAAGAGCAACCAAATTTCCGCCCACTTATTGGTGATATCGTTGTTGCACTGGAATACTTGCACTCGCAGAGTAAAGCCTCAGAGGTCCATAAAGGTGGGGAGCAATGTCTGCCACCTCGATCACCGCCACAACAGGACCGATATGATTTTGTGGATGCAAATTCTAGATTGAGGTTAACTTCCGCCCAACATTTTGAGGTAGATATTTCCATGTCAGTCTAA 1230 0.4618 MSCFSCISRGRSDASRIQIDNAPRSTSSSGTGRTKSHARDDGSKGGSSDGKGKNGVAGSPKSSAARSFTFRELAAATRGFKPVNLIGEGGFGRVYKGRLDTGQLVAVKQLNHDGHQGFQEFIVEVLMLSLLHHSNLVTLFGYCTDGDQRLLVYEYMPMGSVEDHLFDLKPNQELLSWNDRMKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLMELITGRRAIDVSKKPGEQNLVAWSRQFLKDRRKFVQLVDPHLEGQFPLRCLHHAIAITAMCLQEQPNFRPLIGDIVVALEYLHSQSKASEVHKGGEQCLPPRSPPQQDRYDFVDANSRLRLTSAQHFEVDISMSV 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g3035 409 SMART serkin_6 80 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g3035 409 SUPERFAMILY Protein kinase-like (PK-like) 60 355 IPR011009 -
Acco05g3035 409 CDD STKc_IRAK 86 354 - -
Acco05g3035 409 PANTHER OS07G0668900 PROTEIN 3 363 - -
Acco05g3035 409 ProSitePatterns Protein kinases ATP-binding region signature. 86 108 IPR017441 GO:0005524
Acco05g3035 409 ProSiteProfiles Protein kinase domain profile. 80 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g3035 409 Pfam Protein kinase domain 83 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g3035 409 FunFam probable serine/threonine-protein kinase RLCKVII 53 155 - -
Acco05g3035 409 MobiDBLite consensus disorder prediction 15 63 - -
Acco05g3035 409 FunFam Serine/threonine-protein kinase PBS1 156 371 - -
Acco05g3035 409 Gene3D Phosphorylase Kinase; domain 1 55 155 - -
Acco05g3035 409 Gene3D Transferase(Phosphotransferase) domain 1 156 372 - -
Acco05g3035 409 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Acco05g3035 409 MobiDBLite consensus disorder prediction 15 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g3035 Acco-ChrAcco05 44794244 44797084 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g3035 1 356 Glycoside Hydrolase AT3G07070 59.104 1.72e-149 428
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Acco05g3035 Pkinase 5.5e-47 CL0016