Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g3034 ATGTATAGGCTTAAAATTCATGAGGCAACTATCACTTATTTCAACCAAATGAGGGGATATTTCAGTAAAACTAAGCAGCGTCTGATTGTGGTAAATTGGTGCCTGATGGGAAACTGCCTAGCCAAAATTAGAACAAGCCCAAACACTAGTGCTAGCGCTGCAGCTTCAGATGCCGCAGACTTGGATTACTGGGAGGGGCCAAGTCCCACGGGCAAGATTGTTACAACGCCAAATCTAAAAATGTTCAGTTTAGAGGAGCTCAAAAGTGCCACCAGAAACTTCAGACCGGACACAGTGGTGGGGGAGGGTGGCTTTGGCAGAGTATTCAAGGGGTGGATCGACCAAAACACCCTCAAGCCCTCCAAAGTTGGCGTCGGAATTCCCGTGGCCGTCAAGAGATCTAATCCTGATAGTGTTCAGGGCTTAGAAGAATGGCAGAGCGAGGTAAAATTCCTGGGAAAGTTCTCTCATCCCAACCTGGTGAAGCTTATTGGCTACTGCTGCTGGGAGGAGAATCAGCTAATGCTTGTATACGAATACATGCAGAAGGGCAGCTTGGAAAACCACCTCTTTGGAAGAGGACCCGACCCACTTGCATGGGACGTAAGGCTCAAGATCGCCATAGGAGCAGCTCGAGGCTTGGCCTTCCTCCACGCCTCCGAGAAGTCTGTTATCTATAGGGACTTCAAGTCCTCCAACATTTTGCTGGATGAGGAGTTCAACGCCAAGCTTTCAGATTTCGGGCTGGCCAAGCTAGGCCCCGTCAACGGCAGATCCCACATAACCACCCGAGTCATGGGAACTTACGGCTATGCAGCCCCCGAGTATATAGCCACCGGCCATCTGTATGTGAAAAGCGACGTGTACGGGTTTGGCGTGGTGCTGCTAGAAATTCTGACAGGCTTAGTGGCGCTTGATCCCAACAGGCCCGGAGGGGAGCAAAATTTGATGGATTGGAAGAAACCATATATGAGCTATCAGAAGAGGGTGAGAGCCATAATAGACCCGAAACTGGGCCGCAAGTATCCCCTAAACGCCGCATTTAATATATGCCGCCTCATCCTCAAATGTCTAGAACCCGATCCCAAAAATCGACCCTCCATGCAGGATGTCTTGATCACTTTAGAGAGGGCCTATCGCACCCCATATAACCTCAGGCCCAGGCCCATAAAGCCCAATGCCCCCTCTCCAATTCCTTAG 1200 0.5025 MYRLKIHEATITYFNQMRGYFSKTKQRLIVVNWCLMGNCLAKIRTSPNTSASAAASDAADLDYWEGPSPTGKIVTTPNLKMFSLEELKSATRNFRPDTVVGEGGFGRVFKGWIDQNTLKPSKVGVGIPVAVKRSNPDSVQGLEEWQSEVKFLGKFSHPNLVKLIGYCCWEENQLMLVYEYMQKGSLENHLFGRGPDPLAWDVRLKIAIGAARGLAFLHASEKSVIYRDFKSSNILLDEEFNAKLSDFGLAKLGPVNGRSHITTRVMGTYGYAAPEYIATGHLYVKSDVYGFGVVLLEILTGLVALDPNRPGGEQNLMDWKKPYMSYQKRVRAIIDPKLGRKYPLNAAFNICRLILKCLEPDPKNRPSMQDVLITLERAYRTPYNLRPRPIKPNAPSPIP 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g3034 399 CDD STKc_IRAK 100 377 - -
Acco05g3034 399 PANTHER OS01G0588500 PROTEIN-RELATED 53 377 - -
Acco05g3034 399 SUPERFAMILY Protein kinase-like (PK-like) 73 390 IPR011009 -
Acco05g3034 399 Gene3D Transferase(Phosphotransferase) domain 1 181 384 - -
Acco05g3034 399 FunFam Serine/threonine-protein kinase BIK1 65 180 - -
Acco05g3034 399 ProSitePatterns Protein kinases ATP-binding region signature. 100 132 IPR017441 GO:0005524
Acco05g3034 399 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 181 386 - -
Acco05g3034 399 Gene3D Phosphorylase Kinase; domain 1 78 180 - -
Acco05g3034 399 ProSiteProfiles Protein kinase domain profile. 94 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g3034 399 Pfam Protein tyrosine and serine/threonine kinase 98 372 IPR001245 GO:0004672|GO:0006468
Acco05g3034 399 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g3034 Acco-ChrAcco05 44789961 44794148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g3034 80 375 Glycoside Hydrolase AT3G07070 49.498 3.96e-93 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Acco05g3034 PK_Tyr_Ser-Thr 7.3e-46 CL0016