Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g3023 ATGGGCTGTTGTGTATCTTCGTTTTCCAAGGACTCTACTCCCCAAAACATCCCTCATTTGGATAATCACAAGAACAACATCCTCAATCTTCCTTCTTCCTCCAACGGCGCTGATAATACCCCTGCTGCTGCCGACTTCCCGCCGTTCTTGAAGTTCTCCCTCGCCGACCTCAAAGCTGCCACCAACAACTTCAGCCCCGATCACATCGTCTCCGAGAGCGGCGAGAAAGCCCCCAATGTCATCTACAAAGGCCGTCTCCACGATCAAAACCGCCGTTCTATTGCTGTCAAGAAATTCACTAAATTGGCCTGGCCCGACCCTAAACAGTTCGCGGATGAAGCTTTGGGTGTTGGAAAATTAAGACACAACAGGCTTGCCAATTTGATTGGTTATTGTTGTGATGGGGATGAGAGACTACTCGTTGCAGAGTACATGCCCAACGATACCCTCGCCAAACATCTATTTCACTGGGAGAATCAGACAATTGAGTGGCCCATGCGGTTAAGAGTTGCCTTAAACATTGCCGAAGCATTAGATTATTGTCATAGAGAAGGCCATCCATTGTATCATGACTTGAATGCTTACAGAGTTCTCTTTGACGAGAATGGTGATCCTCGCCTATCATGTTTTGGTTTGATGAAGAATAGCAGGGATGGGAAAAGTTATAGCACAAATCTTGCTTATACACCTCCTGAGTATCTGAGGAATGGGAGGGTGACCCCGGAAAGTGTCATCTTCAGCTTTGGAACTGTGTTATTGGATCTTCTAAGTGGAAAGCATATCCCTCCAGGTCATGCTCTTGATATGATAAGGGGAAAGAATATACTTAGCCTTATGGATTCACATTTGGAGGGAAACTTTTTAACTGATGAAGCAACTTTGGTTTTAGATCTTGCTTCTCATTGTTTGCAATATGAACCTCGGGAGCGACCCAAGACGAAGGACCTTGTTATCACACTCTCACCACTACAAAATAAACCTGATGTTCCATCAAATGTGATGCTTGGAATTCCCAAGCAAGAGGAAGTTCCTCCTACTCTGCAGTATCCTCTTTCTCCAATGCGTGATGCTTGTTCTCGAATGGACCTTACAGCTATCCATCAAATTCTGTTAATGGTGCACTACAGAGATGATGAAGGGACTAATGAGTTATCTTTCCAAGAGTGGACCCAGCAAATGAGGGATATGTTGGAGGCAAGAAAACGTGGTGACTTGGCTTTCCGTGACAAGGATTTTAAGACTGCGATGGAGTGTTACTCCCAGTTCATCGAGGTGGGAACAATGGTATCCCCAACAGTGTATGCTCGGAGGAGCCTTTGCCATCTGATGTGTGATCAACCAGATGCTGCTCTAAGAGATGCCATGCAAGCGCAGTGTGTGTATCCTGAGTGGTCCACGGCATTTTACATGCAGGCCGTTGCTCTTTCAAAGTTAAACATGGACAAGGATGCTGCTGACATGCTCAATGAGGCTTCTGCCCTTGAAGAAAAAAGACGGGGCAAAGGTTCTTCCTCTTGA 1518 0.4585 MGCCVSSFSKDSTPQNIPHLDNHKNNILNLPSSSNGADNTPAAADFPPFLKFSLADLKAATNNFSPDHIVSESGEKAPNVIYKGRLHDQNRRSIAVKKFTKLAWPDPKQFADEALGVGKLRHNRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWPMRLRVALNIAEALDYCHREGHPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPGHALDMIRGKNILSLMDSHLEGNFLTDEATLVLDLASHCLQYEPRERPKTKDLVITLSPLQNKPDVPSNVMLGIPKQEEVPPTLQYPLSPMRDACSRMDLTAIHQILLMVHYRDDEGTNELSFQEWTQQMRDMLEARKRGDLAFRDKDFKTAMECYSQFIEVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPEWSTAFYMQAVALSKLNMDKDAADMLNEASALEEKRRGKGSSS 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g3023 505 ProSiteProfiles Protein kinase domain profile. 67 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g3023 505 Coils Coil 477 497 - -
Acco05g3023 505 FunFam probable serine/threonine-protein kinase At5g41260 146 337 - -
Acco05g3023 505 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 34 499 IPR045845 GO:0004672|GO:0009742
Acco05g3023 505 Pfam Protein tyrosine and serine/threonine kinase 80 318 IPR001245 GO:0004672|GO:0006468
Acco05g3023 505 MobiDBLite consensus disorder prediction 1 23 - -
Acco05g3023 505 Gene3D Phosphorylase Kinase; domain 1 42 144 - -
Acco05g3023 505 FunFam probable serine/threonine-protein kinase At4g35230 394 503 - -
Acco05g3023 505 FunFam probable serine/threonine-protein kinase At4g35230 39 144 - -
Acco05g3023 505 Gene3D Transferase(Phosphotransferase) domain 1 146 337 - -
Acco05g3023 505 Gene3D Tetratricopeptide repeat domain 394 501 IPR011990 GO:0005515
Acco05g3023 505 SUPERFAMILY Protein kinase-like (PK-like) 46 328 IPR011009 -
Acco05g3023 505 SUPERFAMILY TPR-like 399 495 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g3023 Acco-ChrAcco05 44700872 44706557 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g3023 52 328 Glycoside Hydrolase AT3G07070 34.868 9.43e-43 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Acco05g3023 PK_Tyr_Ser-Thr 2.1e-26 CL0016