Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g3016 ATGACCCAAGCCGCAAGAACGCAGGCAATCGAACTGAAGGAGGGAGGAAGTAAAGAGACCAGGCTGAGGGAGGTAGGGCTCAAGGAAGGTGCTGCAATTGGAGTGGTGTGTAGGAACGAGGAAGGAAAATATTTGTGTGGATTTGGGGGAGCGGTTAAGGCTGAATCTGCAGTAGTGATTGAAATAATGGGTACAAGAAAAGCGATATGTTTGATGCAGGATTTAGAGAAGAGGAAGGCTATTATTGAAATGGGACGTGCTGAGGCTTTTTGGTTCTGCAAGAAGGGGTCGGCTGATGGGTTAGATTGGAGGGGTAAATGGGAACTAATGGAGGTTATCTCTGCACTAGAAAAGTTGAAGGAAGTGGTGTGGGTTAAGGAGATGCTGATATGATCCGTCGTTTACCCCTTTCCTCTTCATTCAGCTCGCAGCATCTCCTCTGGTCCACCCTTGAAGGTTGAAGACTGTGACCATTGCAGAGCCTCACGCGTTTCACCCTGCATATGGGGTTTCTATCCTTTCAAGCTATATTTGATCATCAGAAAAAGCAGATTGGGCTTAGATCGGGACGATGACACGGAGACGGCGCAAATTGATGCCCAAGGCGGTGATGACTTGGAAATGTCTTGCCCCAACTTCACGTATTCTTTCCTCTATCTGCCTCGTGAACTGTGTCTTCAAAGATCATCGCCTGCAGCTCCGGTGCGCGCAATTTCTCCAATTGCCCAACCTGTGGCTCCTTATATGTGCTTTGGTGGGGAAATGGCATCAAAATCTCTATTCCCATTTTTTTCTCCCACGCTTTTTCTTTTTTGGGTGTTGGTGGCTGATATGGTGAACAAGGATGATGGCAATAATGACGTTTTGGTTCTTTATGGGTTGTCTATACAACTAAAAATGGCAGGCCAGAGCTCTAATGATGGTTCCAGTGCTAGTAATGTTTCAGCAGAATTGTCCGATTCAACTGTTCAGCTAAATGTCAAGACTTTAGATTCCCACATTTATAGTTTTCAAGTGGACAAAAACATGCTAGTTTCATTGTTGAAGGAGAAAATAGCCAATGAAACTGGTGTTCCAGTAGGTCAGCAGCGGTTAATATTCAGGGGGAAAGTCTTGAAGGATAATCATGAACTTTCTGAGTATCATGTTGAGAATGGGGATACATTGCATTTAGTTCAAAGGCAACTGAATCAGTCACAGGTTCCTGGTACCAGTTCTGGCGAGACAACTGGTACAAGTGGAAACCGAGGAAATGATGCAAGCTCTTGGGTGCCTCATAACCGTGTTGGACAAATTTCACACAGTGTTGTTCTGGGGACCTTTAATGTGGGGGAGCAAGGTGAAGGAATTGTTCCTGACCTTAACCGGGTCATTGGGGCGGTTTTGAATTCTATTGGAATTGGTGGGCAGAGCACTGGTGGTGTTGCAAATGGCACACAGTCTTCTTCTGCAAATCCATCTACTCAGGGTCCTTCTGGGAATGAGGCCGGAGGAATGAATCAGAATCAGAACCAATCAGGAAATCAAGCACAGACTGCACAGACATTTCCTAACCAACCATTCCCATCTTTGCCTCAAGTGGTTCAGATTCCTCTGGCTGCAGGATCCATAACTGTGCCATCACTTGGTGCACCAATTCCTCATTCACTGGATACTCTTTCTGAGTTTATTAATCGCATGGAGCAGACATTATCCCAGAATGGTTATCAAACAAATTCGTCTTCAGTGAGTGGAGGAGATCAAATACATGCAGAATTACCCTCCAACCGACAAGGGTTGCCAACAGTTGAAGCATTAAGTACTGTCTTGCATCATGCTGAACAGCTGCTCAGTGGCCATGCCATTGCTGCACTATCTCATATTGCAGGACGCTTGGAGCGAGAAGGAACTACTACTGACCCAAATATAAGGGGTCAAATACAATCTGAGTCAATGCAAATAGGACTTGCCATGCAACATTTGGGTGCATTCCTACTTGAGCTTGGCCGTGCAATCTTGACACTGCGTATGGGACAGTCTCCGGCGGAGTCCGCTGTCAATGCTGGGCCAGCAGTTTATATTTCTCCATCAGGACCTAATCCTATCATGGTGCAGCCTTTCCCACTTCAAACAAGCTCCCTCTTTGGTGGTTCTGTTCCTTCTCCAACTCCTGCAACATTTGGTACTGTTGGTGTTGGAAATGCCCCTCGGAATGTAAACATCCATATACATGCCGGCACTTCTCTTGCGCCAATTGGTTCTCGGCCAAATAATGCGGAAGGGGCACCAAATGAACGACATAATGCTTCTGGCTCTGGTGATTTAGGTTCAATGCGTGCTTTACCTGTGAGAAATATCATTGCCACAGCTGTACCAGCATACCCTTCTGGTGCTGGGACCATTAGTGGCATGCAACCCAGTGGTGTTCCTACTTCACAACTGCCTTCTGATTCAGTTACATTATCATCTGTTATAGCTGATATCAATTCTCGAGCTAGAAACATTTTAGGAAATATTCGAGGAGATAGTACAGTTTTGTCAGGTCAAGCTGAGTCAACCAACCGGGACTTGCCTGTTGGGAGGGAATCACAACCTACTCCTGGAAATGAACAGGTAGATACCATGGAGGCAAATGCTGTAGAAGCTTCCAGTGTGTCTTCAGTTGCTTGCACATCTGAAAGTGGACTACGCAAGCCCCAACCTGAGGCAGCTCAAACTTCTAACAATGAGGAGAGAGATGTTTTGAGCAACAAATTTGGTTCAACTTCTCCCAATCAAGATTCATTAAGTTGGTCAGGAGGAGAAAAACTAGAAAAGTCAGAAAATGCACAAGAAAATGCTCAATCTGCTGGTGAAAAACATGCAACTGAAAGCGCCAAAGCTGTTCCTCTAGGACTGGGTGTGAGTGGCTTGGAGCGTAAGAGGAGAGCGAGACCACAACATCCTCTAAGTAGAGGTGCTGATGATGGATCAGGTAGTTCTTCAGGTAATGAAAATCAGCAATCCAGGACTAGTGGTCTTAATGTATTGCAAGCTCTTGCAAGTCATGGAACTTCTAGTAACCAGACAAATGCTAGTGGTCCATCCCAAGTCCCTGCTTCCCCTGGTGATGGCCAGATTGATGTGGCAGGTGTTATGTCTCAGGTCTTGCATAGCCCTGCTTTGAATGGTTTGTTGGCAGGGGTTTCACAGCAGACTGGAGTCGGCTCACCTGATGTCTTGAGGAACATGTTGCAGCAGTTCACACAGAGCCCACAGATGAGGAACACTGTCAATCAAATTGCCCAACAGGTTGGCAGTCAGGATATGGGGAACATGTTTGCTGGGATGGAAAGAGGGCAAGGTAGTGGCTTTGACTTTTCAAGGATGCTTCAGCAGATGATGCCCATTGTATCTCAAGCTCTTGGAGGTGGAACTCCTCCTCAGTCGTTCTCTGCTGAAAGGAGAGATCCCCAGGCACTATTTGGAGATGGAACGCATAGCAGGGATGAAAACATTGATGATCAAAGTTTACAGATCAATCTGCAACCAGTGGTAGAGAGGATGGAACACCTTAATACACAGTCAGATGTTTTCCGTACAGTGGTTGAAAATGCTATTCAGCTATCCGGAAGGGGAAGTTCTTATAATGGTCTTCTGGATGAGTTATGTAGCGATGAGTTTCTTGCCGGTGACTATGTGGAGATGTTGCGACATGATGTGAGTCAGCGGCTGAATAGGGATTCTGGGCGAGACTAA 3717 0.4609 MTQAARTQAIELKEGGSKETRLREVGLKEGAAIGVVCRNEEGKYLCGFGGAVKAESAVVIEIMGTRKAICLMQDLEKRKAIIEMGRAEAFWFCKKGSADGLDWRGKWELMEVISALEKLKEVVWVKEMLIXSVVYPFPLHSARSISSGPPLKVEDCDHCRASRVSPCIWGFYPFKLYLIIRKSRLGLDRDDDTETAQIDAQGGDDLEMSCPNFTYSFLYLPRELCLQRSSPAAPVRAISPIAQPVAPYMCFGGEMASKSLFPFFSPTLFLFWVLVADMVNKDDGNNDVLVLYGLSIQLKMAGQSSNDGSSASNVSAELSDSTVQLNVKTLDSHIYSFQVDKNMLVSLLKEKIANETGVPVGQQRLIFRGKVLKDNHELSEYHVENGDTLHLVQRQLNQSQVPGTSSGETTGTSGNRGNDASSWVPHNRVGQISHSVVLGTFNVGEQGEGIVPDLNRVIGAVLNSIGIGGQSTGGVANGTQSSSANPSTQGPSGNEAGGMNQNQNQSGNQAQTAQTFPNQPFPSLPQVVQIPLAAGSITVPSLGAPIPHSLDTLSEFINRMEQTLSQNGYQTNSSSVSGGDQIHAELPSNRQGLPTVEALSTVLHHAEQLLSGHAIAALSHIAGRLEREGTTTDPNIRGQIQSESMQIGLAMQHLGAFLLELGRAILTLRMGQSPAESAVNAGPAVYISPSGPNPIMVQPFPLQTSSLFGGSVPSPTPATFGTVGVGNAPRNVNIHIHAGTSLAPIGSRPNNAEGAPNERHNASGSGDLGSMRALPVRNIIATAVPAYPSGAGTISGMQPSGVPTSQLPSDSVTLSSVIADINSRARNILGNIRGDSTVLSGQAESTNRDLPVGRESQPTPGNEQVDTMEANAVEASSVSSVACTSESGLRKPQPEAAQTSNNEERDVLSNKFGSTSPNQDSLSWSGGEKLEKSENAQENAQSAGEKHATESAKAVPLGLGVSGLERKRRARPQHPLSRGADDGSGSSSGNENQQSRTSGLNVLQALASHGTSSNQTNASGPSQVPASPGDGQIDVAGVMSQVLHSPALNGLLAGVSQQTGVGSPDVLRNMLQQFTQSPQMRNTVNQIAQQVGSQDMGNMFAGMERGQGSGFDFSRMLQQMMPIVSQALGGGTPPQSFSAERRDPQALFGDGTHSRDENIDDQSLQINLQPVVERMEHLNTQSDVFRTVVENAIQLSGRGSSYNGLLDELCSDEFLAGDYVEMLRHDVSQRLNRDSGRD 1238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g3016 1238 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 310 1237 - -
Acco05g3016 1238 CDD Ubl_ubiquitin_like 325 392 - -
Acco05g3016 1238 MobiDBLite consensus disorder prediction 568 584 - -
Acco05g3016 1238 MobiDBLite consensus disorder prediction 568 589 - -
Acco05g3016 1238 Pfam Ubiquitin family 325 395 IPR000626 GO:0005515
Acco05g3016 1238 MobiDBLite consensus disorder prediction 1126 1159 - -
Acco05g3016 1238 MobiDBLite consensus disorder prediction 741 769 - -
Acco05g3016 1238 SUPERFAMILY Ubiquitin-like 318 397 IPR029071 -
Acco05g3016 1238 MobiDBLite consensus disorder prediction 839 1033 - -
Acco05g3016 1238 MobiDBLite consensus disorder prediction 394 426 - -
Acco05g3016 1238 PRINTS Ubiquitin signature 354 374 IPR019956 -
Acco05g3016 1238 PRINTS Ubiquitin signature 375 396 IPR019956 -
Acco05g3016 1238 Gene3D - 311 407 - -
Acco05g3016 1238 MobiDBLite consensus disorder prediction 980 1026 - -
Acco05g3016 1238 SMART ubq_7 323 394 IPR000626 GO:0005515
Acco05g3016 1238 FunFam Large proline-rich protein BAG6 315 408 - -
Acco05g3016 1238 ProSiteProfiles Ubiquitin domain profile. 323 398 IPR000626 GO:0005515
Acco05g3016 1238 MobiDBLite consensus disorder prediction 469 524 - -
Acco05g3016 1238 MobiDBLite consensus disorder prediction 839 946 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g3016 Acco-ChrAcco05 44661865 44674600 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g3016 323 394 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 40.278 2.77e-11 60.5