Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g3006 ATGGGAGACACAGAGAGTTGCAGTAACAGGGGTCAGAATTTAGGTTGGAATAATAGTCGAAAGCAAAGTCAAAAGGTCGAAGTTTACAACGAAGTTCTTAGTAGACTTAAGGAATTGAATGTCCCAGAGGCTGCGGATCCTGGCTTTGAAGAGGAGCTCTGGACGCATTTCCATCGACTTCCAGCCAGGTATGCAGTGGATATGAATGTGGAGAGAGCTCAAGATGTCATTATGCATAAAAGGTTGATGCATATGGCACATGATCCTGCTACCAGACCTGCTGTTGAAGTTCGTCTTGTTCAGGTTCGATCTTCTTCAGGTGTGAATTCTAGTGATTCCCTTCATTCAAACTCTCAAAGAAAAGTCAGTCGTCAAGATTCTCATAATACAGGCAACATGAGGCATGGCTATTTGAATATATTTACTGAATCCATTCATCCTGCTCCAGCCTTCGGTTCCTCAGCTAACTTTGAACTTGCGCTTGAAGCAAGCCAGTTAAAAGTTCAATCTAATAGTGGCAATTCGAAATTCTATACACAACCAATGCATGAGATTACGATATCAACAAACGACAAGCCAAAACTTCTCAGTCAGTTGACTTCCCTGCTGTCTGAAACTGGGTTGAATATCCAAGAAGCACATGCTTTTTCAACCTTGGATGGTTATTCACTGGATGTTTTTGTTGTTTGTGGTTGGCCTGTTGAGGAGACCGAGAAGCTTAAACATGTGCTGACCAAACAAATTCAGAAACTTGAGCAGCAGCCTTCCATGAAGAAAATTGGCAGTCAAACTGCAGAGCAAGAACAAATCAGGATGAATTTTATCTCTAATAATGTGAATCTACCTTTATGTGCAAGTGTCCCCTGGGAAGTTGATGCAAGCTGTTTGAAATATGAAAGGAAAATTGCATCTGGACTGTTCTTTGATTTGTATAAAGGTGTTTTCTGTAACCAAGAAGTAGCTATCAAAGTTCTTAAGACTGAGAATCTGAATGAAAATATGCAAAGGGAGTTTGCTCAAGAGGTCTATATTCTGAGTAAATTGTGTCACAAGAATGTTGTCAAATTTGTAGGGGCTAGTACAAAACCTCCTGACCTATTCATTGTCACAGAATACATGTGTGGTGGAAGTCTGTATGATTTTCTGCATACACAGAAGGTTGTGCTTACTCTTTCATATTTGATCAAAGTGGCAATCAATGTTTCTGAAGGGATGAAATATTTGCATCAGAATGACATCATACACAGGGACCTTAAAGCTGCGAATCTTTTGATGGATGAGAATGGGGTAGTGAAGGTTGCTGATTTTGGTGTAGCAAGGGTGGAAGATCAGTCAGGCATTATGACTGCAGAAACTGGAACGTACAGATGGATGGCTCCAGAGGTTATTGAACATAGACCATATAATCACAAAGTCGATGTGTTCAGCTTTGGAATTACTATGTGGGAGCTGCTCACAGGGAAGCTTCCACATGAGCATTTGTCACCATTGCAAGCAGCTGTTGGAGTGGTCCAGAAGGGGTTGAGGCCCAAAATTCCGAGGCACACGCATCCAACGTTAGTAGAGTTGATGAACCATTGCTGGCACCAAAACCCTTCTTTGAGACCCGAATTCTCAGGCATTCTGGAATTTCTGCACCATTTTTCCCAGGATGTACGTTGGAGGCGAAGGTGCCACCCAATAAGAGACGAAGTATAG 1698 0.4187 MGDTESCSNRGQNLGWNNSRKQSQKVEVYNEVLSRLKELNVPEAADPGFEEELWTHFHRLPARYAVDMNVERAQDVIMHKRLMHMAHDPATRPAVEVRLVQVRSSSGVNSSDSLHSNSQRKVSRQDSHNTGNMRHGYLNIFTESIHPAPAFGSSANFELALEASQLKVQSNSGNSKFYTQPMHEITISTNDKPKLLSQLTSLLSETGLNIQEAHAFSTLDGYSLDVFVVCGWPVEETEKLKHVLTKQIQKLEQQPSMKKIGSQTAEQEQIRMNFISNNVNLPLCASVPWEVDASCLKYERKIASGLFFDLYKGVFCNQEVAIKVLKTENLNENMQREFAQEVYILSKLCHKNVVKFVGASTKPPDLFIVTEYMCGGSLYDFLHTQKVVLTLSYLIKVAINVSEGMKYLHQNDIIHRDLKAANLLMDENGVVKVADFGVARVEDQSGIMTAETGTYRWMAPEVIEHRPYNHKVDVFSFGITMWELLTGKLPHEHLSPLQAAVGVVQKGLRPKIPRHTHPTLVELMNHCWHQNPSLRPEFSGILEFLHHFSQDVRWRRRCHPIRDEV 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g3006 565 Coils Coil 234 254 - -
Acco05g3006 565 Gene3D Phosphorylase Kinase; domain 1 285 374 - -
Acco05g3006 565 ProSiteProfiles ACT domain profile. 184 262 IPR002912 -
Acco05g3006 565 Coils Coil 317 337 - -
Acco05g3006 565 Gene3D - 181 258 - -
Acco05g3006 565 MobiDBLite consensus disorder prediction 106 131 - -
Acco05g3006 565 PRINTS Tyrosine kinase catalytic domain signature 407 425 IPR001245 GO:0004672|GO:0006468
Acco05g3006 565 PRINTS Tyrosine kinase catalytic domain signature 370 383 IPR001245 GO:0004672|GO:0006468
Acco05g3006 565 PRINTS Tyrosine kinase catalytic domain signature 453 463 IPR001245 GO:0004672|GO:0006468
Acco05g3006 565 PRINTS Tyrosine kinase catalytic domain signature 472 494 IPR001245 GO:0004672|GO:0006468
Acco05g3006 565 PRINTS Tyrosine kinase catalytic domain signature 516 538 IPR001245 GO:0004672|GO:0006468
Acco05g3006 565 CDD STKc_MAP3K-like 302 545 - -
Acco05g3006 565 MobiDBLite consensus disorder prediction 1 21 - -
Acco05g3006 565 ProSitePatterns Serine/Threonine protein kinases active-site signature. 413 425 IPR008271 GO:0004672|GO:0006468
Acco05g3006 565 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 111 549 - -
Acco05g3006 565 FunFam Kinase suppressor of Ras 1 286 373 - -
Acco05g3006 565 SUPERFAMILY ACT-like 182 258 IPR045865 -
Acco05g3006 565 SMART serkin_6 296 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g3006 565 SUPERFAMILY Protein kinase-like (PK-like) 276 545 IPR011009 -
Acco05g3006 565 Pfam Protein tyrosine and serine/threonine kinase 296 545 IPR001245 GO:0004672|GO:0006468
Acco05g3006 565 ProSiteProfiles Protein kinase domain profile. 296 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g3006 565 Gene3D Transferase(Phosphotransferase) domain 1 375 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g3006 Acco-ChrAcco05 44583083 44590328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g3006 5 552 MAP Kinase Kinase Kinase AT4G35780 54.919 0.0 609
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Acco05g3006 PK_Tyr_Ser-Thr 1.4e-69 CL0016